DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31343 and Lta4h

DIOPT Version :10

Sequence 1:NP_732652.1 Gene:CG31343 / 326133 FlyBaseID:FBgn0051343 Length:961 Species:Drosophila melanogaster
Sequence 2:NP_001025202.1 Gene:Lta4h / 299732 RGDID:1311333 Length:611 Species:Rattus norvegicus


Alignment Length:541 Identity:130/541 - (24%)
Similarity:204/541 - (37%) Gaps:117/541 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 LHYRQTSNFEATIISRDVATPTAIPLTV-------------TPELQREFLVL----TQTTAGE-- 146
            ||.|.:.:|     :|...|.|| .|||             |.:|..|.:|:    .:.|.||  
  Rat    22 LHLRCSVDF-----ARRALTGTA-ALTVQSQEDNLRSLTLDTKDLTIEKVVINGQEVKYTLGESQ 80

  Fly   147 -------------AFGANTNWTITINYTGIHRSDMGGFYISSYTDDDGEQHFLATTQFESTNARH 198
                         |...|....|.|::....:|....:.....|  .|:||....:|.::.:.|.
  Rat    81 GYKGSPMEISLPIALSKNQEVVIEISFETSPKSSALQWLTPEQT--SGKQHPYLFSQCQAIHCRA 143

  Fly   199 AFPCYDEPARRANFTITIHHDPSYTAISNMPVNTAATSSGVT---------------AFQTTPKM 248
            ..||.|.|:.:.          :|||..::|....|..|.:.               .|.....:
  Rat   144 ILPCQDTPSVKL----------TYTAEVSVPKELVALMSAIRDGEAPDPEDPSRKIYRFNQRVPI 198

  Fly   249 STYLVAFIVSDFESTTGELNGIRQRVFSRKGKQDQQEWALWSGLLVESSL--ASYFGVPFALPKL 311
            ..||:|.:|...||   ...|.|..|:|.|   :|.|.:.:.....||.|  |...|.|:...:.
  Rat   199 PCYLIALVVGALES---RQIGPRTLVWSEK---EQVEKSAYEFSETESMLKIAEDLGGPYVWGQY 257

  Fly   312 DQAGI-PDFSAGAMENWGLATYREQYMWWNKQNSTINLKTNIANIIGHEYAHMWFGDLVSIKWWT 375
            |...: |.|..|.|||..|.......:..:|         :::|:|.||.:|.|.|:||:.|.|.
  Rat   258 DLLVLPPSFPYGGMENPCLTFVTPTLLAGDK---------SLSNVIAHEISHSWTGNLVTNKTWD 313

  Fly   376 YLWLKEGFATLFSYESNDIAFPLW-DTYQIFHVNDYNSALLN--DALASAVPMTHYVQTPSEISN 437
            :.||.||...   |....|...|: :.::.||.......|.|  .....:.|.|..|....::..
  Rat   314 HFWLNEGHTV---YLERHICGRLFGEKFRHFHALGGWGELQNTIKTFGESHPFTKLVVDLKDVDP 375

  Fly   438 --RYNTFSYAKPASVL-YMFKNAWTDKVFRTGLNKYLTKNQYTS--CDEWD--LFASFQESADEL 495
              .|::..|.|..::| |:.:.....:||...|..|:.|..|.|  .|:|.  |:|.|::..|.|
  Rat   376 DVAYSSIPYEKGFALLFYLEQLLGGPEVFLGFLKAYVEKFSYQSVTTDDWKSFLYAHFKDKVDLL 440

  Fly   496 GFTLPASVDDIFSSWSHQAGYPLLTVTRNYNA----GTITITQKRYVANKTDTNSATWYVPLNFA 556
            .     .||  :::|.:..|.|  .|..||:.    ..|.::|:...|.:.|.||        |:
  Rat   441 N-----QVD--WNAWLYAPGLP--PVKPNYDVTLTNACIALSQRWVTAKEEDLNS--------FS 488

  Fly   557 TANKYDYRDTSATHYLLNVTE 577
            ..:..|........:|..|.:
  Rat   489 IEDLKDLSSHQLNEFLAQVLQ 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31343NP_732652.1 M1_APN-Q_like 65..510 CDD:341064 114/468 (24%)
ERAP1_C 590..889 CDD:463368
Lta4hNP_001025202.1 leuko_A4_hydro 6..608 CDD:274120 130/541 (24%)
Blue background indicates that the domain is not in the aligned region.

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