DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31300 and nhr-246

DIOPT Version :10

Sequence 1:NP_651373.2 Gene:CG31300 / 326132 FlyBaseID:FBgn0051300 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001256661.1 Gene:nhr-246 / 191499 WormBaseID:WBGene00014192 Length:386 Species:Caenorhabditis elegans


Alignment Length:411 Identity:95/411 - (23%)
Similarity:142/411 - (34%) Gaps:131/411 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EDSPELKVVDLKITPASAQG--------------DHYASVMFRTTAECTTAKGKFSRPLIIKAMP 84
            :|.|  |.|.||| |.:.:|              ||.....|....||...| .||         
 Worm    57 DDLP--KHVVLKI-PQNTKGCSVVENAGGGVKNVDHSVVERFMHNTECNYYK-LFS--------- 108

  Fly    85 EQDGHKKDMLSESHLFETEIGMYCQVLPEFERILRESGDDTKLFVPCI-YHSLEPRKVMIFEDLV 148
                    .|||..|         |:...:  :..::|:  |..||.| ...||..|:   .||:
 Worm   109 --------SLSEKPL---------QIPTTY--LASKAGE--KAPVPVIVLEMLEDCKL---HDLI 149

  Fly   149 PQGYYVIRDRPVAQEELKTAFAKLAKWHAISM---KYIKEQPDFLKEFKYGLFEMPTVKTDPFIT 210
            | |:        .:::|.....:|.|.|..|:   |:.:..||..|                   
 Worm   150 P-GF--------NEDQLFKIVDELVKLHIFSLTTEKWKEIVPDESK------------------- 186

  Fly   211 TGMQSFIE--------MLDRLPELRKYKPHFEKIKDKYMQRLQAVMKEY-HENRKSDAFYVLCHG 266
            ..|..|::        .|.:.|||.....:.|...|.....||.:..|| :|.|.|    |:|||
 Worm   187 LAMSGFLQCMVADVGRKLAQNPELGVILSYVENTLDTDPNYLQKMRDEYINEERPS----VICHG 247

  Fly   267 DFHLRNMMFKNNKGTGAHEDTM--LVDFQISNLCPITIDLTYSIYMLMEPEQRREMGKDLINHYL 329
            |.....:::..       ||.:  :||:|.::......||.:.:......:.|:...|.|::||.
 Worm   248 DLWAPQILWDK-------EDNIAGIVDWQATHRGSPMEDLHHILSTCTSVQNRKTFTKPLLDHYY 305

  Fly   330 TVLVATLKSIGYPGELPTQAKLW--DEIHKNKYYDFFLLSTFLPLILAIKSKSFKVNDLI----- 387
            ..|...||..|:       ...|  :||.....|.|...::     ..|.:..|..|..:     
 Worm   306 NKLKVGLKEKGF-------KTTWTREEIDIEYNYSFIYGAS-----RTIFANGFWANSPVLQTDG 358

  Fly   388 -QDPE------TRQKTYFLDT 401
             .|||      .|.|:|..||
 Worm   359 KPDPERIKESFVRCKSYLEDT 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31300NP_651373.2 EcKL 52..341 CDD:397213 70/317 (22%)
nhr-246NP_001256661.1 CHK 134..314 CDD:214734 51/221 (23%)

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