DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31272 and Sv2b

DIOPT Version :9

Sequence 1:NP_650013.3 Gene:CG31272 / 326130 FlyBaseID:FBgn0051272 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001103223.1 Gene:Sv2b / 64176 MGIID:1927338 Length:683 Species:Mus musculus


Alignment Length:652 Identity:155/652 - (23%)
Similarity:253/652 - (38%) Gaps:130/652 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEKNIKTAIPEKSKGLENDKDADGNSDSTAEAEATPTEEGSATFDKAIEGAGFGIFNLMLLIV- 64
            :..|..|.| |.::.||      .|.:|..|| .....||.:..::..|:..|.|.|...|..| 
Mouse    59 VKSKQTKMA-PSRADGL------GGQADLMAE-RMEDEEELAHQYETIIDECGHGRFQWTLFFVL 115

  Fly    65 --SIPAQSAAIFESSSMSYILPIAECDLRLTLEDKGVLNAVAYAGMTISAIAWGYLADTKGRKKI 127
              ::.|....||   .:|:.||.||.|:.|:...||:|..:.|.||...|...|.|||..||||:
Mouse   116 GLALMADGVEIF---VVSFALPSAEKDMCLSSSKKGMLGLIVYLGMMAGAFILGGLADKLGRKKV 177

  Fly   128 LYWGYLIDAVCVFGSALSQNFSMLVMFKFLGGLVVNGPAAVLFTYLTEMHGPKHRSSVLMIVGMV 192
            |.....|:|.....|:..|.:...:..:.:.|:.:.|...::|.|.:|....:.|...|..:|:.
Mouse   178 LSMSLAINASFASLSSFVQGYGAFLFCRLISGIGIGGSLPIVFAYFSEFLSREKRGEHLSWLGIF 242

  Fly   193 TSTATVSLPLLAWGIFPR-DWDFEF-WGLQVHSWQIFLFVLGIPSLISGLIFCSMPESPRFLMAQ 255
            ..|..:....:||.|.|. .|.|.. .....|||::|:.|..:|:.:|.:....||||||||:..
Mouse   243 WMTGGIYASAMAWSIIPHYGWGFSMGTNYHFHSWRVFVIVCALPATVSMVALKFMPESPRFLLEM 307

  Fly   256 GRNEEALQAFKQIYHVNTRKPKDSYPIKALIQEVPNRKAAQNEVIYTIEEKSGEVPTKRQSRTLA 320
            |:::||....||::..|.|           .:..|       |.::|:    ..:.|.:|.....
Mouse   308 GKHDEAWMILKQVHDTNMR-----------AKGTP-------EKVFTV----SHIKTPKQMDEFI 350

  Fly   321 E-SLRAGLQQMKPLVR-----KPLLGLAICCY------------VMQFGIFLGMNTIRLWLPQL- 366
            | ....|....:.|||     |.:...|:.|.            |:.|.:.|....:.:|.|.: 
Mouse   351 EIQSSTGTWYQRWLVRFMTIFKQVWDNALYCVMGPYRMNTLILAVVWFTMALSYYGLTVWFPDMI 415

  Fly   367 -FASMAEYEA-LHAGDGLDVSMCTI---LEFSVNQTAETALN---------------YADACSEP 411
             :....||:: :....|..|...||   :|..::|..:...:               :.|.|...
Mouse   416 RYFQDEEYKSKMKVFFGEHVHGATINFTMENQIHQHGKLVNDKFIKMYFKHVLFEDTFFDKCYFE 480

  Fly   412 KVISMDMYLNNIIVSAT--------------------------------------------GFVG 432
            .|.|.|.|..|..:.:|                                            .|:|
Mouse   481 DVTSTDTYFKNCTIESTTFYNTDLYKHKFINCRFINSTFLEQKEGCHMDFEEDNDFLIYLVSFLG 545

  Fly   433 YF--FAGGILRAL-----GPKRMMTYGLFLSGTFGLMLYFSVSSLMTLIVSATFLTITGIAVSSL 490
            ..  ..|.|:.||     |..:|:...:.:|......|:|. :|...:|........|.||..:.
Mouse   546 SLSVLPGNIISALLMDRIGRLKMIGGSMLISAVCCFFLFFG-NSESAMIGWQCLFCGTSIAAWNA 609

  Fly   491 LGAV-VALFPTQLRTVVVAIAMMCGRFGALSGNLLFPVFVQTGCLPPFIMVSSVLILSGILSISL 554
            |..: |.|:||..|.....|.....:|||:.||.:|..||....:.|.::.::.|:..|::::.|
Mouse   610 LDVITVELYPTNQRATAFGILNGLCKFGAILGNTIFASFVGITKVVPILLAAASLVGGGLIALRL 674

  Fly   555 PD 556
            |:
Mouse   675 PE 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31272NP_650013.3 MFS 62..555 CDD:119392 136/588 (23%)
2A0115 74..524 CDD:273327 127/542 (23%)
Sv2bNP_001103223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73 4/14 (29%)
synapt_SV2 8..683 CDD:130366 155/652 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8715
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.