DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31272 and sv2

DIOPT Version :9

Sequence 1:NP_650013.3 Gene:CG31272 / 326130 FlyBaseID:FBgn0051272 Length:563 Species:Drosophila melanogaster
Sequence 2:XP_009296040.1 Gene:sv2 / 570651 ZFINID:ZDB-GENE-000607-80 Length:522 Species:Danio rerio


Alignment Length:557 Identity:160/557 - (28%)
Similarity:267/557 - (47%) Gaps:54/557 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IPEKSKGLENDKDADGNSDSTAEAEATPTEEGSATFDKAIEGAGFGIFNLMLLIVSIPAQSAAIF 74
            :|.:|:   .|.:...:|.:..|.:...:.....|:::|:|.||||:|:.:||:|...|.::...
Zfish     1 MPRQSR---EDTEPLLSSANNEEDDEQASCRKKLTYEEAVEKAGFGLFHWLLLVVCGWANASDAV 62

  Fly    75 ESSSMSYILPIAECDLRLTLEDKGVLNAVAYAGMTISAIAWGYLADTKGRKKILYWGYLIDAVCV 139
            |...:|::||.|.|||:|:..|.|:|.|..:.||.:....||:|||.:||:.:|.....::.  .
Zfish    63 EILCVSFLLPTARCDLQLSSADMGILTASIFLGMMVGGCVWGFLADRRGRRSVLVVSLAVNG--T 125

  Fly   140 FG--SALSQNFSMLVMFKFLGGLVVNGPAAVLFTYLTEMHGPKHRSSVLMIVGMVTSTATVSLPL 202
            ||  ::|:..|.:.::.:|..|:.|.|...|:|:|.:|......|.:::..:........:....
Zfish   126 FGAVASLAPTFWLFLLLRFFSGVGVGGSIPVIFSYFSEFQPCLRRGAMISALATFWMAGNILAAG 190

  Fly   203 LAWGIFPRDWDFEFWG-LQVHSWQIFLFVLGIPSLISGLIF-CSMPESPRFLMAQGRNEEALQAF 265
            :||.:.||......|| |...||::|:.:..||||.|.||| ..|||||:|||..||..|||..|
Zfish   191 VAWLVIPRTSLHADWGWLDFQSWRLFVVLCSIPSLSSALIFRLFMPESPKFLMEAGREMEALSVF 255

  Fly   266 KQIYHVNTRKPKDSYPIKALI-----QEVPNRKAAQNEVIYTIEEKSGEVPTKRQSRT--LAESL 323
            ::||.:|.|.....:|:..|:     .||.||                  |:...||:  ....|
Zfish   256 QKIYKLNNRGATKPFPVSGLMIRPKDDEVKNR------------------PSHSSSRSQRFINQL 302

  Fly   324 RAGLQQMKPLVRKPLLGLAICCYVMQFGIFLGMNTIRLWLPQLFASMAEYEALHAGDGLDVSMCT 388
            ...|..:|.|..:||...::...::.|.|..|...:.:|.|:||.        .|.||  .|.|.
Zfish   303 TQALVPLKQLFVRPLASRSVVLVIIFFCISFGYYGLWMWFPELFK--------RAEDG--GSPCA 357

  Fly   389 ILEFSVNQTAETALNYADACSEPKVISMDMYLNNIIVSATGFVGYFFAGGILRALGPKRMMTYGL 453
              ..|..|.||....|.        :...:|:...|.:|:...|..|...::..:|.|.:::..|
Zfish   358 --NMSRAQNAENEKCYP--------VKTAVYMEGFITAASNLPGNIFTILLMDRIGGKILLSVSL 412

  Fly   454 FLSGTFGLMLYFSVSSLMTLIVSATFLTITGIAVSSLLGAVVALFPTQLRTVVVAIAMMCGRFGA 518
            .:||....::|...:...:||||..|..::.|:.::|......|:|||||:..:.:....||..|
Zfish   413 LVSGVSVFVIYVVKTKTQSLIVSCVFSGVSVISWNALDVVGTELYPTQLRSSALGVFTGVGRVAA 477

  Fly   519 LSGNLLFPVFVQTGCLPPFIMVSSVLILSGILSISLP 555
            :.||::|...|.:.|..|.:||..:|:..|:.::.||
Zfish   478 IMGNVVFGQLVDSSCAVPLLMVCVLLLAGGLAALWLP 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31272NP_650013.3 MFS 62..555 CDD:119392 144/503 (29%)
2A0115 74..524 CDD:273327 133/460 (29%)
sv2XP_009296040.1 2A0115 33..488 CDD:273327 145/494 (29%)
MFS 50..500 CDD:119392 141/489 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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