DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31272 and sv2ca

DIOPT Version :10

Sequence 1:NP_650013.3 Gene:CG31272 / 326130 FlyBaseID:FBgn0051272 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001121811.1 Gene:sv2ca / 562345 ZFINID:ZDB-GENE-060526-233 Length:745 Species:Danio rerio


Alignment Length:644 Identity:142/644 - (22%)
Similarity:249/644 - (38%) Gaps:134/644 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LENDKDADGNSDSTAEAEATPTEEGSATFDKAIEGAGFGIFNLML---LIVSIPAQSAAIFESSS 78
            |||::.||             .||.:..::..|:..|.|.|...|   |.:::.:....:|   .
Zfish   125 LENERQAD-------------EEELAQQYELIIQECGHGRFQWQLFFTLGLALMSDGVEVF---V 173

  Fly    79 MSYILPIAECDLRLTLEDKGVLNAVAYAGMTISAIAWGYLADTKGRKKILYWGYLIDAVCVFGSA 143
            :.::||.||.|:.:.....|.|.::.|.||.:.|..||.:||..||::.|.....::....|.|:
Zfish   174 VGFVLPSAETDMCVPDSSSGWLGSIVYLGMMVGAFFWGGMADKVGRRQCLLICMSLNGFFAFLSS 238

  Fly   144 LSQNFSMLVMFKFLGGLVVNGPAAVLFTYLTEMHGPKHRSSVLMIVGMVTSTATVSLPLLAWGIF 208
            ..|.:.:.::.:.:.|..:.|...::|:|..|:...:.|...|..:.|......:....:||.|.
Zfish   239 FVQGYGLFLLCRMIAGFGIGGAVPIVFSYFAEVLAREKRGEHLSWLCMFWMIGEIYASAMAWAII 303

  Fly   209 PR------------------DWDFEFW-GLQVHSWQIFLFVLGIPSLISGLIFCSMPESPRFLMA 254
            |.                  .|.|... ..|.|||::|:.|..:|.:.:.:....|||||||.:.
Zfish   304 PHYGQITTASSQFINYHHYTSWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFYLE 368

  Fly   255 QGRNEEALQAFKQIYHVNTR---KPKDSYPIKALIQEVPNRKAAQNEVIYTIE-EKSGEVPTKRQ 315
            .|:::||....|||:..|.|   :|:..:.:        ||.....::...:| .:||...:|..
Zfish   369 VGKHDEAWMILKQIHDTNMRARGQPEKVFTV--------NRIKIPKQIDEFVEMHESGNFFSKAI 425

  Fly   316 SRTLAESLRAGLQQMKPL---VRKPLLGLAICCYVMQFGIFLGMNTIRLWLPQLFASMAEYEALH 377
            .|...|.....|..:|..   |::..:.|||....:.|| :.|::   :|.|.:...:...|  :
Zfish   426 FRIKTELHGIWLNFLKCFNYPVKESTVKLAIVWLTLSFG-YYGLS---VWFPDVIKHLQNDE--Y 484

  Fly   378 AGDGLDVSMCTILEFSVNQTAETALN-----------------------------YADACS---- 409
            |..|...:...|.:|:.|.|.|..::                             :.|..|    
Zfish   485 ASKGQRHNNERIEDFTFNFTLENQIHTNSLFINDRFINMKFKSVTFINSTFQSCFFEDVTSVGSF 549

  Fly   410 -----------------EPKVISMDMYLNNIIVSATG---------------FVGYF-----FAG 437
                             :.|:.:.|:..:....:.||               ||.:.     ..|
Zfish   550 FRNCTFIEAVFYNTDIDDSKLKNTDVINSTFYHNKTGCQMTFEDDYSAYWVYFVNFLGTLAVLPG 614

  Fly   438 GILRAL-----GPKRMMTYGLFLSGTFGLMLYFSVSSLMTLIVSATFLTITGIAVSSLLGAVVAL 497
            .|:.||     |...|:.:.:.|||.....|:|..|..|.:.:...:..::..|.:||......|
Zfish   615 NIVSALLMDKIGRLSMLGFSMILSGISCFFLWFGTSESMMIGMLCLYNGLSISAWNSLDVVTTEL 679

  Fly   498 FPTQLRTVVVAIAMMCGRFGALSGNLLFPVFVQTGCLPPFIMVSSVLILSGILSISLPD 556
            :||..|...........:..|:.|||:|...|......|.::.||||:..|::.:.|||
Zfish   680 YPTDRRGTGFGFCNALCKLAAVMGNLIFGSLVGITKAIPILLASSVLVGGGLVGLRLPD 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31272NP_650013.3 synapt_SV2 15..556 CDD:130366 140/642 (22%)
sv2caNP_001121811.1 synapt_SV2 3..745 CDD:130366 142/644 (22%)

Return to query results.
Submit another query.