DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31272 and Svopl

DIOPT Version :9

Sequence 1:NP_650013.3 Gene:CG31272 / 326130 FlyBaseID:FBgn0051272 Length:563 Species:Drosophila melanogaster
Sequence 2:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus


Alignment Length:546 Identity:117/546 - (21%)
Similarity:201/546 - (36%) Gaps:148/546 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GFGIFNLMLLIVSIPAQSAAIFESSSMSYILPIAECDLRLTLEDKGVLNAVAYAGMTISAIAWGY 117
            || .|.|:|.:|.       ..|...::.:.|:..|:.:|.......:..:.:.|..:|:|.:|.
  Rat     2 GF-CFLLLLQVVE-------AMEIMLIAVVSPVIRCEWQLENWQVAFVTTMVFFGYMVSSILFGL 58

  Fly   118 LADTKGRKKILYWGYLIDAVCVFGSALSQNFSMLVMFKFLGGLVVNGPAAVLFTYLTEMHGPKHR 182
            |||..||.|||...:|..|.....::.|.::...|..:.:.|..|:|.|..|. ..||....|:|
  Rat    59 LADRYGRWKILLLSFLWGAYFSLLTSFSPSYIWFVFLRTMVGCGVSGHAQGLI-IKTEFLPTKYR 122

  Fly   183 ------SSVLMIVG--MVTSTATVSLPLLAWGIFPRDWDFEFWGLQVHSWQIFLFVLGIPSLISG 239
                  |.|..:.|  ::.|.|:|.:|.:.|.          |.:::.|         ||.:|..
  Rat   123 GYMLPLSQVFWLAGSLLIISMASVVIPTIGWR----------WLIRIAS---------IPGIILI 168

  Fly   240 LIFCSMPESPRFLMAQGRNEEALQAFKQIYHVNTRKPKDSYPIKALIQEVPNRKAAQNEVIYTIE 304
            :.|..:|||.||.::.|..:.||...:.|..:|          ::::.|        ..::..|.
  Rat   169 MAFKFIPESARFNVSTGNTQAALDTLESIAKMN----------RSVMPE--------GRLVEPIL 215

  Fly   305 EKSGEVPTKRQSRTLAESLRAGLQQMKPLVRKPLLGLAICCYVMQFGIFLGMNTIRLWLPQLFAS 369
            ||.|......:|:.|                                    ..|:::|:..|..|
  Rat   216 EKRGRFADLLESKYL------------------------------------RTTLQIWIIWLGIS 244

  Fly   370 MAEYEALHAGDGLDVSMCTILEFSV------NQTAETALNYADACSEPKVISMDMY----LNNII 424
            .|.|       |:.::...:||..:      ....|...|..||..........|:    ...:|
  Rat   245 FAYY-------GVILASAELLERDLVCGSKSESEPEVVENMGDAEEGRSPCYCHMFAPSDYRTMI 302

  Fly   425 VSATGFVGYFFAGGILRALGPKRMMTYGL-FLSGTFGLMLYFSVSSLMTLIVSATFLTITGIAVS 488
            :|..|.:          ||.|..::  |: ||    |..|..|:    |:..:|.|..:..|..|
  Rat   303 ISTLGEI----------ALNPLNIL--GINFL----GRRLSLSI----TMGCTALFFLLLNICTS 347

  Fly   489 S--------LLGAVVA------------LFPTQLRTVVVAIAMMCGRFGALSGNLLFPVFVQTGC 533
            |        :|.|:||            ::||.:|.:.:..:....|.||:....:..|.:....
  Rat   348 SAGLIGFLFMLRALVAANFNTIYIYTAEVYPTPMRALGMGTSGSLCRIGAMVAPFISQVLMSASF 412

  Fly   534 LPPFIMVSSVLILSGILSISLPDPAK 559
            |....:.|||.::..|.:.:||...|
  Rat   413 LGALCLFSSVCVVCAISAFTLPIETK 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31272NP_650013.3 MFS 62..555 CDD:119392 109/531 (21%)
2A0115 74..524 CDD:273327 102/488 (21%)
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 113/539 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347153
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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