DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31272 and CG4462

DIOPT Version :10

Sequence 1:NP_650013.3 Gene:CG31272 / 326130 FlyBaseID:FBgn0051272 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_650849.1 Gene:CG4462 / 42376 FlyBaseID:FBgn0038752 Length:573 Species:Drosophila melanogaster


Alignment Length:608 Identity:110/608 - (18%)
Similarity:203/608 - (33%) Gaps:213/608 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LENDKDADGNSDSTAEAEATPTEEGSATFDKAIEGAGFGIFNLMLLIV----SIPA---QSAAIF 74
            :|||.|       ...|...|...||......:  ..|||:.|..:::    .|||   .:..||
  Fly    22 MENDVD-------KRIATPPPAPAGSDVIADVV--GDFGIWQLRTILIIFLCKIPAAWFMACIIF 77

  Fly    75 -------------------ESSSMSYILPIAEC----DLRLTLEDKGVLNAVAYAGMTISA---- 112
                               .||:.|:.:...:|    :...|..:....|.|:.....|..    
  Fly    78 TGPELYPGSEFTCDTSYLTSSSNSSFSISDNQCYVLDESTGTSSECEQFNYVSSFDSLIMQFNLV 142

  Fly   113 ------IAW-------GYL-ADTKGRKKILYWG------YLIDAV----CVFGSALSQNFSMLVM 153
                  :||       |.| ....|.|.:|  |      |.:.||    |...:..:::||:...
  Fly   143 CLRDIFVAWTQYWHLFGVLVGGVMGTKMML--GISPRSTYCVGAVAQILCGVVTGYARDFSLHCA 205

  Fly   154 FKFLGGLVVNGPAAVLFT----YLTEMHGPKHRSSVLMIVGMVTSTATVSLPLLAWGIFPRDWDF 214
            |:.|..:.    .|::||    ...::....||...:::.....|...:.||.|:          
  Fly   206 FRCLSAVC----CAIMFTAGQAIFADITAGMHRIGAIILYDTFWSIGVILLPGLS---------- 256

  Fly   215 EFWGLQVHSWQIFLFVLGIPSLISGLIFCSMPESPRFLMAQGRNEEALQAFKQIYHVNTRKPKDS 279
            .|:    :||.:....:..|:::..|:....|:|||:|:....:..::...:||.          
  Fly   257 SFF----NSWSLIYVGITFPTIMLILLLYWTPDSPRWLLRHAADRFSIDNVEQIL---------- 307

  Fly   280 YPIKALIQEVPNRKAAQNEVIYTIEEKSGEVPT--KRQSRTLAESLRA------------GLQQM 330
                        |:.|      .|.::|.::|.  ::|...|:|.|:|            |.:..
  Fly   308 ------------REGA------AINDRSFKIPPDFRQQLEQLSERLKAQPPPAPWTELWKGKRAK 354

  Fly   331 KPLVRKPLLGLAICCYVMQF-GIFLGM----------NTIRLWLPQLFASMAEYEALH------- 377
            ..:|   ...||:..:|:.| |:.|.:          |||.:...::...   :.|||       
  Fly   355 THMV---AAHLALAFFVINFMGMLLNIRSFGRDYLVPNTIAMGFSEIIGC---FLALHFTLKHNK 413

  Fly   378 ------------AG------------DGLDVSMCTILEFSVNQTAETALNYADACSEPKVISMDM 418
                        ||            |.:|..    |:.|:.....|....|.:|::..:::.  
  Fly   414 WKWQCAGVFNILAGILGCMGWIFTNADSMDAD----LKVSLWMIIATIPKAAVSCAQSMILAC-- 472

  Fly   419 YLNNIIVSATGFVGYFFAGGILRALGPKRMMTYGL-------FLSGTFGLMLYFSVSSLMTLIVS 476
             :|.::.:                 ..|::..:.:       .||..|..:|. .:.:.|:|...
  Fly   473 -MNELMPA-----------------NKKQLFVFSVVTWARVWLLSAPFFNVLR-KIDTAMSLTSY 518

  Fly   477 ATFLTITGIAVSSLLGAVVALFP 499
            ..|..:.||..|.||...:::.|
  Fly   519 CVFSILGGICTSLLLTPRLSVSP 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31272NP_650013.3 synapt_SV2 15..556 CDD:130366 110/608 (18%)
CG4462NP_650849.1 MFS_SLC22 123..533 CDD:340875 85/488 (17%)

Return to query results.
Submit another query.