DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31272 and CarT

DIOPT Version :10

Sequence 1:NP_650013.3 Gene:CG31272 / 326130 FlyBaseID:FBgn0051272 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:479 Identity:94/479 - (19%)
Similarity:173/479 - (36%) Gaps:133/479 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 AVAYAGMTISAIAWGYLADTKGRKKILYWGYLIDAVCVFGS---ALSQNFSMLVMFKFLGGLVVN 163
            |....|..:....:|.|.| :|.:::.|:..|  |..:.||   :||::|......:.:.||.:.
  Fly   183 AALNTGGPVGVYLFGLLND-RGGRRLSYFVCL--ATLLAGSLMTSLSKDFWTWAGSRVIVGLTIP 244

  Fly   164 GPAAVLFTYLTEMHGPKHRSSVLMIVGMVTSTATVSLPLLAWGI--FPRDWD--FEFWGLQVHSW 224
            ....:.|....|:.|..:||    .|.::|.|...|..:|..|:  ..|||.  .....|..:::
  Fly   245 AVYQIPFIISLELVGENYRS----FVTVMTCTFYTSGIMLLSGVTYLERDWVRLSYITSLPFYAY 305

  Fly   225 QIFLFVLGIPSLISGLIFCSMPESPRFLMAQGRNEEALQAFKQIYHVNTRKPKDSYPIKALIQEV 289
            .:::||              ||||||:|:.:||.||||:..:::..||.|:..::..:|      
  Fly   306 FLYMFV--------------MPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLK------ 350

  Fly   290 PNRKAAQNEVIYTIEEKSGEVPTKRQSRTLAESLRAGLQQMKPLVRKPLLGLAICCYVMQFGIFL 354
                         :|.:......|:|.:.:|.                 :|||..|....    :
  Fly   351 -------------LEAQIRRDKLKKQKKKMAN-----------------VGLADLCRTPN----M 381

  Fly   355 GMNTIRLWLPQLFASMAEYEALHAGDGLDVSMCTILEFSVNQTAETALNYADACSEPKVISMDMY 419
            .:.||.:                           .|.:..|:|....|:|..     ..:..:.|
  Fly   382 RLKTILI---------------------------TLSWFANETVYLGLSYYG-----PALGTNQY 414

  Fly   420 LNNIIVSATGFVGYFFAGGILRALGPKRMMTYGLFLSGTF--------------GLMLYFSVSSL 470
            ::..:.:......|......:...|.:..::..:.|.|..              .|:||....:|
  Fly   415 VSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKAL 479

  Fly   471 MTLIVSATFLTITGIAVSSLLGAVVALFPTQLRTVVVAIAMMCGRFGALSGNLLFPVFVQTG--- 532
            :    ||:||.|...|..        |:|||:|.:.:..:...|..|.:.    .|.....|   
  Fly   480 L----SASFLIIYPFAGE--------LYPTQVRGIGIGASSYIGGLGLIG----IPFITYLGKDN 528

  Fly   533 CLPPFIMVSSVLILSGILSISLPD 556
            ...|.:::..:.:|.|:..:.||:
  Fly   529 LKLPLVIMGFLSMLGGMTGLRLPE 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31272NP_650013.3 synapt_SV2 15..556 CDD:130366 93/477 (19%)
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 92/476 (19%)
xylE <306..>342 CDD:182225 17/49 (35%)

Return to query results.
Submit another query.