DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31272 and oct-2

DIOPT Version :10

Sequence 1:NP_650013.3 Gene:CG31272 / 326130 FlyBaseID:FBgn0051272 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_509899.3 Gene:oct-2 / 181325 WormBaseID:WBGene00003843 Length:757 Species:Caenorhabditis elegans


Alignment Length:466 Identity:102/466 - (21%)
Similarity:177/466 - (37%) Gaps:113/466 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 GMTISAIAWGYLADTKGRK-KILYWGYLIDAVCVFGSAL--SQNFSMLVMFKFLGGLVVNGPAAV 168
            |..:.....|:::|..||| .|..:|.|   ..:||..|  |:.|.:.::.:||  |.....||.
 Worm   317 GYLVGCFVGGFISDRYGRKTAITGFGIL---TMLFGFLLTYSKEFEIFLVVRFL--LAATNEAAD 376

  Fly   169 LFTYL--TEMHGPKHRSSVLMIVGMVTSTATVSLPLLAWGIFPRDWDFEFWGLQVHSWQIFLFVL 231
            |..|:  .|:.|.|:||.|..::....:.....|.|:|:              ...||.:...:.
 Worm   377 LAAYVLCMEVTGTKYRSIVGSLIQAPWACGYAFLALIAY--------------LTKSWTMIHLIC 427

  Fly   232 GIPSLISGLIFCSMPESPRFLMAQGRNEEALQAFKQIYHVN-TRKPKDSYPIKALIQEVPNRKAA 295
            .:..:||.::...:|||||:|:...:.::|.:..::..|.| :|.|.|    ..|::....:|..
 Worm   428 VLLHIISLMLLYFLPESPRWLILNNKTKQAEKIIREACHYNKSRLPSD----LGLVRHAEKKKWM 488

  Fly   296 QNEVIYTIEEKSGEVPTKRQSRTLAESLRAGLQQMKPLVRKPLLGLAICCYVMQFGIF----LGM 356
                      |..|.|:                                    .|.:|    |..
 Worm   489 ----------KHNEKPS------------------------------------YFHLFRSSELRF 507

  Fly   357 NTIRLWLPQLFASMAEYEALHAGDGLDVSMCTILEFSVNQTAETALNYADACSEP--KVISMDMY 419
            ..:.|::..:..::..|       |:.:::                  :|. |.|  :|...:.:
 Worm   508 RNVVLFIVWIATALVYY-------GMVIAL------------------SDQ-SSPGRRVFDGNFF 546

  Fly   420 LNNIIVSATGFVGYFFAGGILRALGPKRMMTYGLFLSGTFGL----MLYFSVSSLMTLIVSATFL 480
            |||.:..|.......|...:|| :|.||.....||.||.|.|    |:|...|:|..:.:..:..
 Worm   547 LNNAMAGAIELPTLVFCVFLLR-MGRKRSQMLVLFGSGLFLLTSVVMVYRKQSTLALIFMLLSKA 610

  Fly   481 TITGIAVSSLLGAVVALFPTQLRTVVVAIAMMCGRFGALSGNLLFPVFVQTGCLPPFIMVSSVLI 545
            .|.| :.:.|......|.||.:|...|.|:.|..|.||.:...:..:...|..|.|..:.:...:
 Worm   611 CIQG-SFNILYIFTSELNPTVVRNSAVGISSMVARMGAGASGYIAILSDVTMPLVPMTIFACFSL 674

  Fly   546 LSGILSISLPD 556
            |:|.|.:.||:
 Worm   675 LAGCLVLLLPE 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31272NP_650013.3 synapt_SV2 15..556 CDD:130366 101/464 (22%)
oct-2NP_509899.3 MFS_SLC22 281..673 CDD:340875 97/452 (21%)

Return to query results.
Submit another query.