DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31272 and svop-1

DIOPT Version :9

Sequence 1:NP_650013.3 Gene:CG31272 / 326130 FlyBaseID:FBgn0051272 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_498960.2 Gene:svop-1 / 176250 WormBaseID:WBGene00014021 Length:520 Species:Caenorhabditis elegans


Alignment Length:599 Identity:141/599 - (23%)
Similarity:228/599 - (38%) Gaps:127/599 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEKNIKTAIPEKSKGLENDKDAD-------------------GNSDSTAEA-----EATPTEEG 41
            |.:|.|.|.:.|.|...|...|..                   .|.|...|.     :.:|..|.
 Worm     1 MGDKAILTEVLEASNLTEAYVDLTAKQLIKEIRHVGDDFAVRYSNLDDRTELGEPTDQRSPDSEK 65

  Fly    42 SATFDKAIEGAGFGIFNLMLLIVSIPAQSAAIFESSSMSYILPIAECDLRLTLEDKGVLNAVAYA 106
            :.|.|:|:|..|||.|.|.|.|::..|..|...|...:|.|.|...|:..::...:.::....::
 Worm    66 TFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVFS 130

  Fly   107 GMTISAIAWGYLADTKGRKKILYWGYLIDAVCVFG--SALSQNFSMLVMFKFLGGLVVNG-PAAV 168
            ||.:|:..||.:.|..||:|.|.:..|:  .|:.|  |.:|.:|.:|:.|:.|.|..:.| |.:|
 Worm   131 GMMLSSTFWGKICDRFGRRKGLTFSTLV--ACIMGVISGMSPHFYVLLFFRGLTGFGIGGVPQSV 193

  Fly   169 LFTYLTEMHGPKHRSSVLMIVGMVTSTATVSLPLLAWGIFPRDWDFEFWGLQVHSWQIFLFVLGI 233
              |...|......|:..::::....:...|...|||:.:           ::...|:..:|:..:
 Worm   194 --TLYAEFLPTAQRAKCVVLIESFWAIGAVFEALLAYFV-----------MESFGWRALMFLSSL 245

  Fly   234 PSLISGLIFCSMPESPRFLMAQGRNEEALQAFKQIYHVNTRKPKDSYPIKALIQEVPNRKAAQNE 298
            |..|..:....:|||.||.||.|..|.||:..:                         ..|..|.
 Worm   246 PLGIFAVASFWLPESARFDMASGHPERALETLQ-------------------------AAARMNR 285

  Fly   299 VIYTIEEKSGEVPTKRQSRTLAESLRAGLQQ-------MKPLVRKPLLGLAICCYVMQFGIFLGM 356
            |         ::||.|    |..|.:||.:.       :.|.:||..: |..|.:.:....:.||
 Worm   286 V---------QLPTGR----LVSSTKAGSESRGDIANLLSPDLRKTTI-LLWCIWAITAFSYYGM 336

  Fly   357 NTIRLWLPQLFASMAEYEALHAG---DGLDVSMCTILEFSVNQTAETALNYADACSEPKVISMDM 418
               .|:...||.|   ::..|.|   :|..:.:|..|         |..:|.|..|         
 Worm   337 ---VLFTTVLFQS---HDECHGGLFSNGTQMEVCQPL---------TRSDYFDLLS--------- 377

  Fly   419 YLNNIIVSATGFVGYFFAGGILRALGPKRMMT--YGLFLSGTFGLMLYFSVSSL-MTLIVSATFL 480
                  .:...|.|......|:...|.|:.|.  |.:|...||  :|||.:... :|:::.....
 Worm   378 ------TTLAEFPGLIITVLIIEWFGRKKTMALEYAVFAIFTF--LLYFCLDRFTVTVLIFVARA 434

  Fly   481 TITGIAVSSLLGAVVALFPTQLRTVVVAIAMMCGRFGALSGNLLFPVFVQTGCLPPFIMVSSVLI 545
            .|:| |..........::||.||.|.:.......|.||:....:..|..:.....|..:..:..|
 Worm   435 FISG-AFQCAYVYTPEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSLSLPIGIYGTAAI 498

  Fly   546 LSGILSISLPDPAK 559
            |..|.|:|||...|
 Worm   499 LGLIASLSLPIETK 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31272NP_650013.3 MFS 62..555 CDD:119392 115/508 (23%)
2A0115 74..524 CDD:273327 105/465 (23%)
svop-1NP_498960.2 2A0119 16..514 CDD:273328 135/584 (23%)
MFS 87..508 CDD:119392 115/507 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.