DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31272 and Sv2a

DIOPT Version :9

Sequence 1:NP_650013.3 Gene:CG31272 / 326130 FlyBaseID:FBgn0051272 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_476558.2 Gene:Sv2a / 117559 RGDID:619715 Length:742 Species:Rattus norvegicus


Alignment Length:661 Identity:153/661 - (23%)
Similarity:257/661 - (38%) Gaps:140/661 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IPEKSKGLENDKDADGN-----SDSTAEAEATPTEEGSA-----------TFDKAIEGAGFGIFN 58
            ||....|.:.::.|||.     ....::.|..|...|.|           .::..:...|.|.|.
  Rat   101 IPRAESGGKGERMADGAPLAGVRGGLSDGEGPPGGRGEAQRRKDREELAQQYETILRECGHGRFQ 165

  Fly    59 LMLLIV---SIPAQSAAIFESSSMSYILPIAECDLRLTLEDKGVLNAVAYAGMTISAIAWGYLAD 120
            ..|..|   ::.|....:|   .:.::||.||.|:.|:..:||:|..:.|.||.:.|..||.|||
  Rat   166 WTLYFVLGLALMADGVEVF---VVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLAD 227

  Fly   121 TKGRKKILYWGYLIDAVCVFGSALSQNFSMLVMFKFLGGLVVNGPAAVLFTYLTEMHGPKHRSSV 185
            ..||::.|.....:::|..|.|:..|.:...:..:.|.|:.:.|...::|:|.:|....:.|...
  Rat   228 RLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEH 292

  Fly   186 LMIVGMVTSTATVSLPLLAWGIFPR-DWDFEFW-GLQVHSWQIFLFVLGIPSLISGLIFCSMPES 248
            |..:.|......|....:||.|.|. .|.|:.. ..|.|||::|:.|...||:.:.....:.|||
  Rat   293 LSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTTQPES 357

  Fly   249 PRFLMAQGRNEEALQAFKQIYHVNTR---KPKDSYP---IKALIQEVPNRKAAQNEVIYTIEEKS 307
            |||.:..|:::||....||::..|.|   .|:..:.   ||.:.||        :|:|       
  Rat   358 PRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIHQE--------DELI------- 407

  Fly   308 GEVPTKRQSRTLAESLRAGLQQMKPLVRKPLLGLAICCY--------VMQFGIFLGMN----TIR 360
             |:    ||.|.....|.|::.:.  :...:.|..:.|:        :|..|::..|:    .:.
  Rat   408 -EI----QSDTGTWYQRWGVRALS--LGGQVWGNFLSCFSPEYRRITLMMMGVWFTMSFSYYGLT 465

  Fly   361 LWLPQLFASM--AEYEA---LHAGDGLD-VSMCTILEFSVNQTAE-----------TALNYADA- 407
            :|.|.:...:  .:|.|   :..|:.:: |:....||..:::..:           .::::.|: 
  Rat   466 VWFPDMIRHLQAVDYAARTKVFPGERVEHVTFNFTLENQIHRGGQYFNDKFIGLRLKSVSFEDSL 530

  Fly   408 ---CSEPKVISMDMYLNNIIVSATGFVG-----YFFAGGIL---RALGPKRMMTYGLFLSGTFGL 461
               |....|.|.:.:..|.....|.|..     |.|....|   ..|..|......:..:|....
  Rat   531 FEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLVNSTFLHNKEGCPLDVTGTGEGAY 595

  Fly   462 MLYFSVSSLMTL------IVSATFLTITG----------------------------IAVSSLLG 492
            |:|| ||.|.||      ||||..:...|                            ||:..|.|
  Rat   596 MVYF-VSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVLSCVSCFFLSFGNSESAMIALLCLFG 659

  Fly   493 AV------------VALFPTQLRTVVVAIAMMCGRFGALSGNLLFPVFVQTGCLPPFIMVSSVLI 545
            .|            |.|:|:..||..........:..|:.|..:|..||......|.:..|:.|.
  Rat   660 GVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVGITKAAPILFASAALA 724

  Fly   546 LSGILSISLPD 556
            |...|::.||:
  Rat   725 LGSSLALKLPE 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31272NP_650013.3 MFS 62..555 CDD:119392 137/590 (23%)
2A0115 74..524 CDD:273327 127/544 (23%)
Sv2aNP_476558.2 synapt_SV2 1..742 CDD:130366 153/661 (23%)
Interaction with SYT1 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145 10/43 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8952
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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