DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31272 and sv2b

DIOPT Version :9

Sequence 1:NP_650013.3 Gene:CG31272 / 326130 FlyBaseID:FBgn0051272 Length:563 Species:Drosophila melanogaster
Sequence 2:XP_002933355.1 Gene:sv2b / 100497731 XenbaseID:XB-GENE-6041859 Length:711 Species:Xenopus tropicalis


Alignment Length:614 Identity:143/614 - (23%)
Similarity:237/614 - (38%) Gaps:109/614 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AEATPTEEGSA-TFDKAIEGAGFGIFNLMLLIV---SIPAQSAAIFESSSMSYILPIAECDLRLT 93
            ||....||..| .::..|:..|.|.|...|.:|   ::.|....:|   .:.::||.||.|:.|:
 Frog   110 AERIEDEEQLAYQYENIIQECGHGRFQWTLFVVLGLALMADGVEVF---VVGFVLPSAEKDMCLS 171

  Fly    94 LEDKGVLNAVAYAGMTISAIAWGYLADTKGRKKILYWGYLIDAVCVFGSALSQNFSMLVMFKFLG 158
            ..:||:|..:.|.||.:.|..||.|||..||||.|.....|:|...|.|:..|.:.:.:..:.:.
 Frog   172 RSNKGMLGLIVYLGMMLGAFVWGGLADKVGRKKCLIISLTINAAFSFVSSFVQGYGLFLFCRLIS 236

  Fly   159 GLVVNGPAAVLFTYLTEMHGPKHRSSVLMIVGMVTSTATVSLPLLAWGIFPR-DWDFEF-WGLQV 221
            |..:.|...::|.|.:|....:.|...|..:.|......|....:||.|.|. .|.|.. .....
 Frog   237 GFGIGGSLPIVFAYFSEFLAREKRGEHLSWLCMFWMIGAVYAAAMAWSIIPHYGWGFSMGTHYHF 301

  Fly   222 HSWQIFLFVLGIPSLISGLIFCSMPESPRFLMAQGRNEEALQAFKQIYHVNTR---KPKDSYPIK 283
            |||::|:.:..:|.:.|.:....||||||||:..|:::||....|.|:..|.|   :|:..:.:.
 Frog   302 HSWRVFVVICVLPCIASIIALKFMPESPRFLLETGKHDEAWMILKNIHDTNMRAKGEPEKVFTVS 366

  Fly   284 ALIQEVPNRKAAQNEVIYTIEEKSGE------VPTKRQSRTLAESLRAGLQQMKPLVRKPLLGLA 342
            .:      :...|.:....|:..:|.      |......:.:.|::   |.......||..:.||
 Frog   367 HI------KTPKQPDEFIEIQSSTGTWFQRWFVRIMTVIKQIWENM---LHCFSGQFRKNTIFLA 422

  Fly   343 ICCYVMQFGIFLGMNTIRLWLPQLFASMAEYEALHAGDGLDVSMCTILEFSVNQTAET------- 400
            :..:.|....:    .:.:|.|.....:.:.:  :|......:...:..|:.|.|.|.       
 Frog   423 VVWFTMSLSYY----GLTVWFPDTIRYLQDED--YASKVKRFTDENVKNFNFNFTLENQIHEDGE 481

  Fly   401 ---------ALNYA-------DACSEPKVIS-----------------MDMYL------------ 420
                     .|.|.       |.|....|.|                 .|:|.            
 Frog   482 YYNDRFYKMKLKYVTFKDSLFDECYFEDVTSTGSIFENCTIQNTVFYNTDLYQHKFIDCNFINVT 546

  Fly   421 ---------------NNIIVSATGFVGYF--FAGGILRAL-----GPKRMMTYGLFLSGTFGLML 463
                           |:.::....|:|..  ..|.|:.||     |..||:...:.:|......|
 Frog   547 FSQPKEGCHIDFEEDNDFLIYLVSFLGSLSVLPGNIISALLMDKIGRIRMIAGSMLISAVCCFFL 611

  Fly   464 YFSVSSLMTLIVSATFLTITGIAVSSLLGAV-VALFPTQLRTVVVAIAMMCGRFGALSGNLLFPV 527
            :|. :|...:|........|.||..:.|..| |.|:||..|.....|.....:..|:.||.:|..
 Frog   612 FFG-NSESAMIGWQCLFCGTSIAAWNALDVVTVELYPTNKRATAFGILNGLCKLAAIFGNSIFAS 675

  Fly   528 FVQTGCLPPFIMVSSVLILSGILSISLPD 556
            ||....:.|.::.|:.|:..|::|:.||:
 Frog   676 FVGITKVIPILLASTALVGGGLISLRLPE 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31272NP_650013.3 MFS 62..555 CDD:119392 131/581 (23%)
2A0115 74..524 CDD:273327 121/535 (23%)
sv2bXP_002933355.1 synapt_SV2 1..711 CDD:130366 143/614 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724235at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9375
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.