DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hang and Plagl2

DIOPT Version :9

Sequence 1:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_061277.2 Gene:Plagl2 / 54711 MGIID:1933165 Length:496 Species:Mus musculus


Alignment Length:391 Identity:69/391 - (17%)
Similarity:107/391 - (27%) Gaps:175/391 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly  1419 QCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKD--CGNVYSGRKSLWVHRYKKHPQVPNPAECS 1481
            ||:...:.|:..:||..|...|.|  ...|||..  ||..::.:..|:.|......|.|:  :|.
Mouse    41 QCEISGTPFSNGEKLRPHSLPHPE--QRPYSCPQLHCGKAFASKYKLYRHMATHSAQKPH--QCM 101

  Fly  1482 LCRKVFFDRQMHDNHTPTCNRKPITSTGAHQQQDGQLHSHHTAKRTIFRHKTGDDDDEEDDDEQQ 1546
            .|.|:|..:....||..|           |......||                           
Mouse   102 YCDKMFHRKDHLRNHLQT-----------HDPNKEALH--------------------------- 128

  Fly  1547 QLEERANSDGNGTTVGVASGSTAAAGTSLKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVD 1611
                                                 |:.||..:..:..:.:|:..|       
Mouse   129 -------------------------------------CSECGKNYNTKLGYRRHLAMH------- 149

  Fly  1612 NPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFR-----GDSKQNPI 1671
               ||                  .:|:.:|.:|.:||....||..|.|.|.|     ...|::|.
Mouse   150 ---AA------------------SSGDLSCKVCLQTFESTQALLEHLKAHSRRVAGGAKEKKHPC 193

  Fly  1672 DGEATQLTNNNHTTNNNNNNSMHLRELHAVGLMPNQQQQSLNNSCNSSMNHNNNSSSNRSKSMKR 1736
            |                                                 |.:.....| |.::|
Mouse   194 D-------------------------------------------------HCDRRFYTR-KDVRR 208

  Fly  1737 -------KRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLTCRRCQLKFDTK 1794
                   :::..|:|||..|...::|.||:.:.|..|:..:...||    |.|....|......|
Mouse   209 HLVVHTGRKDFLCQYCAQRFGRKDHLTRHVKKSHSQELLKIKTEPV----DMLGLLSCSSTVSVK 269

  Fly  1795 E 1795
            |
Mouse   270 E 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368
C2H2 Zn finger 1067..1088 CDD:275368
C2H2 Zn finger 1279..1298 CDD:275371
C2H2 Zn finger 1308..1325 CDD:275371
C2H2 Zn finger 1420..1440 CDD:275368 5/19 (26%)
C2H2 Zn finger 1450..1468 CDD:275368 5/19 (26%)
Plagl2NP_061277.2 C2H2 Zn finger 42..62 CDD:275368 5/19 (26%)
C2H2 Zn finger 70..92 CDD:275368 5/21 (24%)
zf-H2C2_2 85..109 CDD:372612 8/25 (32%)
C2H2 Zn finger 100..120 CDD:275368 7/30 (23%)
C2H2 Zn finger 129..149 CDD:275368 4/19 (21%)
C2H2 Zn finger 158..178 CDD:275368 8/19 (42%)
C2H2 Zn finger 193..213 CDD:275368 5/69 (7%)
C2H2 Zn finger 221..239 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.