DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hang and CG30020

DIOPT Version :9

Sequence 1:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster


Alignment Length:1509 Identity:268/1509 - (17%)
Similarity:451/1509 - (29%) Gaps:522/1509 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   711 MTCRCCNKYFSTYKNF----------MAHVRKKY---------------PQLPRNLCFNCLKMND 750
            ::||||.|....|...          .|...:|.               |:||:::|..|     
  Fly    23 LSCRCCLKTNVEYVKLDSVSVARSLDPADATEKIPLLRCLLFCVSADNAPELPQHICLEC----- 82

  Fly   751 SKALFISHLKKRNCINLFRVLNALRGKTTTVVVPIADDVADDGATGSIPVADAGAGVVAMNSPTV 815
            ||:|.:::...:|.:....:|       ...:.|              .|:....|.:|..    
  Fly    83 SKSLQVAYYFLQNALRAHEIL-------CRKLCP--------------KVSKRLNGTLAQE---- 122

  Fly   816 TASGEVVTPGGGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQ 880
                        .|:|......:.|....:||::|......:.|.:.|:.      |..:..|..
  Fly   123 ------------QEKPACAEPVQPLKTMRHECQVCGVVLYNRLELKQHIR------QHAEGLSYN 169

  Fly   881 CSFCGLDFADPVDRRRHYNNMDCI---------------------VRLRCMTCDAKL-------- 916
            |..|............||..|..:                     |:..|...|.:|        
  Fly   170 CKLCSFTSLKQRTLFEHYVTMHNMPLSQAEEYVKSKHLPAPKEEEVKAVCTLEDMELLIPTVLRP 234

  Fly   917 ETHQRFLDHVYQDHLGGVGGG-AVSDNASTTGSGMARSNSMEHSPGKRSLLGALGVGSSAEESRS 980
            |.:.:...|:..|.|..:... |||.:              |..|...||               
  Fly   235 EDYVQPHPHIDNDQLRDIDHQLAVSMD--------------EPVPSVDSL--------------- 270

  Fly   981 SSAAPPLTSTPKLAGG-----------NQVGGGG-----------STSASAAAAAQ---SSAN-- 1018
            :|..||: .||.::.|           .||.|.|           ::|::...:.|   ||.|  
  Fly   271 TSTLPPM-DTPNVSIGTEYLVLPDGSLQQVNGSGVVIEYIDDSKPNSSSNVNVSLQNLLSSHNDP 334

  Fly  1019 RDASAPKSQYFSRMPQV-----------------CPICGQQYNNYNNVLRHMESKHPNKLPETYK 1066
            .|....:......|||:                 |..|.:.::....:..| :..|.| ||:.: 
  Fly   335 MDIDVNELIVEEMMPQIRIKPKPAVIGTSIHKHKCKFCPKTFSTVARLKSH-QLTHSN-LPKFF- 396

  Fly  1067 CVRCGLGYPRISYLREH--MINVHGVDKNRHSG-----GFEYIVNADAVKLADGSTPNV----YT 1120
            |.:|.....|.:.|.:|  |:: |.||:|..:|     |.|..|.:..:.|.:.||.:.    |.
  Fly   397 CDQCDFYSLRSADLIQHYKMVH-HRVDENGKTGKEQAQGIESRVYSCDMCLFETSTVSQLRTHYK 460

  Fly  1121 GRYDYVMKDLM---------SITNG-------------------------GTLDDEEEEPGSVAK 1151
            .|:.....::.         :.|.|                         |.|:.:...|..|..
  Fly   461 ERHTVQPTEVQLRPSWTGEPTTTRGVAAKQQTPAKILNHTDIPLGIKYPPGVLETQAPLPQPVVH 525

  Fly  1152 KMRLDDSSNNSSLVGVASQQKE----------CPICNAVFSNNIGLSNHM------RSHYTASN- 1199
            :...|.......:...::...|          .|:..|..||::.::|..      .:..|||| 
  Fly   526 QPMPDPMQQTEPMATTSTTITESGDINVVVDATPLFYAATSNSLLVTNPAPVTTVEETTGTASNH 590

  Fly  1200 --AVNAALAAANRMTPKSLTITATPATDSELGVGGTMSESAPAT--------PANVPPAMANQTP 1254
              .:...::..|  .|.:..:...||..|.:.|.|.|.:....|        ||:..|.:..   
  Fly   591 AFGIFPEISEGN--LPVNEAVQQAPANSSSVSVFGDMQDFIDNTDVAAICTIPADGMPVVDG--- 650

  Fly  1255 QEQAVFRR---SLDQAADRRFRRMR------------------------CRICQRRFSSKKSYRY 1292
             :..|...   |||..|:..|....                        ....|....:......
  Fly   651 -DDIVIDNNNISLDFDAENLFEDFEEEEDDTVADEEDEADNEDENDNNDAATDQNLLLTSDDDDV 714

  Fly  1293 HMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIKDEMIIKQFECDVCSIVYSSESEL 1357
            ....|.|.:::|...|..||.:|..:...:.|:|...|.|        .:.|::|:.:|:.:..|
  Fly   715 DDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLA--------PYRCELCTNLYNMKRLL 771

  Fly  1358 QQHKRSVHKLTSASASTSASTSSKIDDDSLMDDGKPTSSDLADLSTLAAGGSTASAPLYWYQCKY 1422
            .:|.::|||.....             |.:...|...|....::..|..|  ....|:  ..|..
  Fly   772 IKHYKTVHKRMPTR-------------DMVQAKGDKVSVARTNIEKLYPG--RIKNPM--LMCAK 819

  Fly  1423 CPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPNPAECSLCRKVF 1487
            ||....::.::..|:|:|...  ||...:....|:..||.              |.||..|.:.|
  Fly   820 CPFECESDSEMRKHLNAHHGI--NDGVSEHANEVFIIRKL--------------PFECPRCIRSF 868

  Fly  1488 -----FDRQMHDNH---------TPTCNR--------------KPITSTGAHQQQDGQLHSHHTA 1524
                 ..|.:..:|         ||.|..              :|:.|.....|.:..:.:...|
  Fly   869 AAKTTLSRHLQRSHLVDTIIEMQTPHCGEAITTTMATSSSTISEPVNSVTVDGQHNEMMQTDVGA 933

  Fly  1525 KRTIFRHKTGDDDDEEDDDEQQQLEERANSDGNG-----------------------TTVGVASG 1566
            ::.......||.::|...|           ||.|                       ||..:|:.
  Fly   934 EKMTEALGNGDGNEEGGTD-----------DGTGVKAEPAVPEEELDPVTLDAATAVTTTAIAAA 987

  Fly  1567 -STAAAGTSLKIRIPEVACTICGARFT---------DQEHFSKHIQKHEQELY------VDN--- 1612
             |.|||.|:..:..| ||.|...:...         |.:......|:....::      .||   
  Fly   988 ISAAAAATATSLESP-VATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVSKALSDNASS 1051

  Fly  1613 --PL--------AAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHR--------- 1658
              |:        ....:..|| .|.....|.:.:..:.|.||.:||.::..|..|.         
  Fly  1052 SCPINESYKLLSTTALETSPA-KGLRSNSRLHRSSIHICKLCNQTFDELGKLVKHEMELHSNTER 1115

  Fly  1659 -KWHFRGDSKQNPIDGEATQLTNNNHTTNNNNNNSMHLRELHAVGLMPNQQQQSLNNSCNSSMNH 1722
             :|.::          ....:.|.::.|       :.|.:.|                       
  Fly  1116 SRWGYQ----------HKCAICNTSYRT-------LTLLKFH----------------------- 1140

  Fly  1723 NNNSSSNRSKSMKR--KRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLTC- 1784
                       |||  .|:.:|:.|..:|::...|.||....|..             |..|.| 
  Fly  1141 -----------MKRHSNRKSQCKLCPKSFVTIAELERHTKAKHSK-------------DKTLRCF 1181

  Fly  1785 -RRCQLKFDTKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHL---KEEVI- 1844
             ..|:..|..|...|.|:.|.....|..||      :|    :::||...|:.||:   |.|:. 
  Fly  1182 MDGCRKTFAFKHHLIRHQKASHLSTRYICP------VC----NKEEKSNVHLKNHMSVHKGEITY 1236

  Fly  1845 -VPVATKAAIERTAAMESAAADANAAATLSALGEGAETEDQFAEKVEAAGATTTDKLTNPDEEDS 1908
             .|...::.:.|...:..|....:...|...||..:......|...:...||....|        
  Fly  1237 KCPKCDRSYLRRGRLVTHALIIHDLRFTTEELGNLSSLATNQARPNDLKVATPVGLL-------- 1293

  Fly  1909 DDLDEDSSGDDDDS 1922
             |..:|.||..:::
  Fly  1294 -DGRKDVSGASEEN 1306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368 3/20 (15%)
C2H2 Zn finger 1067..1088 CDD:275368 6/22 (27%)
C2H2 Zn finger 1279..1298 CDD:275371 1/18 (6%)
C2H2 Zn finger 1308..1325 CDD:275371 4/16 (25%)
C2H2 Zn finger 1420..1440 CDD:275368 5/19 (26%)
C2H2 Zn finger 1450..1468 CDD:275368 3/17 (18%)
CG30020NP_610627.2 zf-AD 25..106 CDD:285071 18/92 (20%)
C2H2 Zn finger 369..389 CDD:275368 3/20 (15%)
C2H2 Zn finger 397..418 CDD:275368 6/20 (30%)
C2H2 Zn finger 442..460 CDD:275368 3/17 (18%)
C2H2 Zn finger 730..750 CDD:275368 6/19 (32%)
C2H2 Zn finger 758..777 CDD:275368 5/18 (28%)
C2H2 Zn finger 1089..1110 CDD:275368 7/20 (35%)
C2H2 Zn finger 1124..1144 CDD:275368 6/60 (10%)
C2H2 Zn finger 1151..1172 CDD:275368 6/20 (30%)
C2H2 Zn finger 1180..1203 CDD:275368 7/22 (32%)
C2H2 Zn finger 1210..1230 CDD:275368 8/29 (28%)
C2H2 Zn finger 1238..1254 CDD:275368 2/15 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440026
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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