DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hang and Zfp316

DIOPT Version :9

Sequence 1:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_001100591.1 Gene:Zfp316 / 304293 RGDID:1311647 Length:1016 Species:Rattus norvegicus


Alignment Length:968 Identity:174/968 - (17%)
Similarity:264/968 - (27%) Gaps:370/968 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   975 AEESRSSSAAPPLTSTPKLAGGNQVGGGGSTSASAAAAAQSSANRDASAPKSQYFSRMPQVCPIC 1039
            |:..|..:|..|.        |.:..|.|....|..|..|.:           :....|..||.|
  Rat   353 AKHQRYHAAVKPF--------GCEECGKGFVYRSHLAIHQRT-----------HTGEKPFPCPDC 398

  Fly  1040 GQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVN 1104
            |:::...::::.|... |..:.|  |:||.||.|:.|.|||..|        :..|:|...|   
  Rat   399 GKRFVYKSHLVTHRRI-HTGERP--YRCVFCGAGFGRRSYLVTH--------QRTHTGERPY--- 449

  Fly  1105 ADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEEEPGSVAKKMRLDDSSNNSSL----- 1164
                       |.::.||                                  ..|.:|:|     
  Rat   450 -----------PCLHCGR----------------------------------SFSQSSALARHQA 469

  Fly  1165 VGVASQQKECPICNAVFSNNIGLSNHMRS----------------HYT--ASNAVNAALAAANRM 1211
            |..|.:...||.|...|........|.|.                |..  |.|.|..|:||....
  Rat   470 VHTADRPHCCPDCGQAFRLRADFQRHRRGGGCTEPSSGDGALTAPHEVGMAPNEVEMAIAAVATA 534

  Fly  1212 TPKSL-TITATPATDSELGVGGTMSE----------SAPATPANVPPAMANQTPQEQAVFRRSLD 1265
            .|:.| :..|....:.:.||....:|          .|.|..|.||.:..:..|           
  Rat   535 EPEELESGLAEKNEEPKAGVADGDNEVEVRQDEQVVVAAAAEATVPDSKKDPEP----------- 588

  Fly  1266 QAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHG 1330
               |||||.|...:.:....|...:.:|                                |.:|.
  Rat   589 ---DRRFREMGNGLAEGEGPSSHRFGFH--------------------------------FPMHP 618

  Fly  1331 KA--IKDEMIIKQFECDVCSIVYSSESELQQHKRSVHKLTSASASTSASTSSKIDDDSLMDDGKP 1393
            |:  ..|...:..|.        .....||...|.:.....|..|..   ...:..|.....|..
  Rat   619 KSWLHPDGFPLLGFP--------EFSERLQTDGRHLPGPLGAPLSLQ---GMGLACDPFRSAGPG 672

  Fly  1394 TSSDLADLSTLAAGGSTASAPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYS 1458
            ..:|....:...|.||..|.|        .|:....              :.:.:.|.|||..:.
  Rat   673 ARADSGLRAFAPAVGSLLSEP--------APAALAE--------------EESPWICSDCGKTFG 715

  Fly  1459 GRKSLWVHRYKKHPQVPNPAECSLCRKVFF-------DRQMHDNHTPTCNRKPITSTGAHQQQDG 1516
            .|.:|..|  :::.....|..|:.|.|.|.       .|:.|....|.    |....||...:..
  Rat   716 RRAALAKH--QRYHAGERPHRCADCGKSFVYGSHLARHRRTHTGERPF----PCPECGARFARGS 774

  Fly  1517 QLHSH---HTAKRTIFRHKTGDDDDEEDDDEQQQLEERANSDGNGTTVGVASGSTAAAGTSLKIR 1578
            .|.:|   ||.::..                                                  
  Rat   775 HLAAHVRGHTGEKPF-------------------------------------------------- 789

  Fly  1579 IPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDL 1643
                .|.:|||.|:.:.|.:.|.:.|..|    .|                         |||..
  Rat   790 ----VCGVCGAGFSRRAHLTAHGRAHTGE----RP-------------------------YACAE 821

  Fly  1644 CAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTTNNNNNNSMHLRELHAVGLMPNQQ 1708
            |.:.|.|..||..|:..|......:.|                                      
  Rat   822 CGRRFGQSAALTRHQWAHAEEKPHRCP-------------------------------------- 848

  Fly  1709 QQSLNNSCNSSMNHNNNSSSNRSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEP 1773
                  .|.....|:::...:| ::...::..:|..|...|...:||.:|    .:......|.|
  Rat   849 ------DCGKGFGHSSDFKRHR-RTHTGEKPFRCADCGRGFAQRSNLAKH----RRGHTGERPFP 902

  Fly  1774 PVIVVDDHLTCRRCQLKFDTKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNH 1838
                      |..|..:|..:.:.:.|:..... .||:.     |..||...|:...|:.|:..|
  Rat   903 ----------CPECGKRFSQRSVLVTHQRTHTG-ERPYL-----CSNCGRRFSQSSHLLTHMKTH 951

  Fly  1839 LKEEVIVPVATKAAIERTAAMESAAADANAAATLSALGEGAETEDQFAEKVEAAGATT 1896
            ..:       ..|..:.|:|...|.|.|......|..|.||.|      .:|.||.|:
  Rat   952 RGQ-------GGAPAQNTSAKAQAPAKAIPPLPPSGSGSGAGT------LLEFAGGTS 996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368 5/20 (25%)
C2H2 Zn finger 1067..1088 CDD:275368 10/20 (50%)
C2H2 Zn finger 1279..1298 CDD:275371 2/18 (11%)
C2H2 Zn finger 1308..1325 CDD:275371 0/16 (0%)
C2H2 Zn finger 1420..1440 CDD:275368 1/19 (5%)
C2H2 Zn finger 1450..1468 CDD:275368 7/17 (41%)
Zfp316NP_001100591.1 KRAB 151..211 CDD:214630
KRAB 151..190 CDD:279668
COG5048 <335..495 CDD:227381 44/219 (20%)
C2H2 Zn finger 339..359 CDD:275368 2/5 (40%)
C2H2 Zn finger 367..387 CDD:275368 5/30 (17%)
zf-C2H2 367..387 CDD:278523 5/30 (17%)
zf-H2C2_2 379..404 CDD:290200 7/35 (20%)
C2H2 Zn finger 395..415 CDD:275368 5/20 (25%)
zf-H2C2_2 407..432 CDD:290200 9/27 (33%)
C2H2 Zn finger 423..443 CDD:275368 10/27 (37%)
zf-H2C2_2 435..460 CDD:290200 9/80 (11%)
C2H2 Zn finger 451..471 CDD:275368 5/53 (9%)
zf-H2C2_2 463..486 CDD:290200 6/22 (27%)
C2H2 Zn finger 479..497 CDD:275368 5/17 (29%)
C2H2 Zn finger 707..727 CDD:275368 7/21 (33%)
zf-H2C2_2 719..744 CDD:290200 7/26 (27%)
C2H2 Zn finger 735..755 CDD:275368 5/19 (26%)
zf-H2C2_2 747..772 CDD:290200 6/28 (21%)
COG5048 <760..947 CDD:227381 51/338 (15%)
C2H2 Zn finger 763..783 CDD:275368 4/19 (21%)
zf-H2C2_2 775..800 CDD:290200 9/78 (12%)
C2H2 Zn finger 791..811 CDD:275368 7/19 (37%)
C2H2 Zn finger 819..839 CDD:275368 7/19 (37%)
zf-C2H2 845..867 CDD:278523 4/66 (6%)
C2H2 Zn finger 847..867 CDD:275368 4/64 (6%)
zf-H2C2_2 859..884 CDD:290200 4/25 (16%)
C2H2 Zn finger 875..895 CDD:275368 6/23 (26%)
zf-H2C2_2 887..912 CDD:290200 8/38 (21%)
C2H2 Zn finger 903..923 CDD:275368 4/19 (21%)
zf-H2C2_2 916..940 CDD:290200 6/29 (21%)
C2H2 Zn finger 931..951 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.