DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hang and mld

DIOPT Version :9

Sequence 1:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster


Alignment Length:2192 Identity:364/2192 - (16%)
Similarity:625/2192 - (28%) Gaps:835/2192 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TTTTTAAVAAAVATTTASVALEAT-ATQPGTTTTTVATA------SAGTTSPEAAIPTAATAT-- 65
            ||..:|:.||:||:..:|..|..| ||:..|.|....:|      :..|:||..|..|.:|:|  
  Fly    87 TTVASASAAASVASNKSSGTLAKTCATEAETETPQTLSANPVNPGTKATSSPSEAATTLSTSTRP 151

  Fly    66 -SARNSNSERSARQNCCRLCIAPQTECISIINSYAADKEPLSTKIHNCVG--------------- 114
             ||..|::..|.       ..:|.....:...:.:|...|......|.|.               
  Fly   152 ASASFSSTSFST-------STSPMRRRTTNTTAPSASPAPRGRSSDNAVDYTLSGAHSSMDIVLE 209

  Fly   115 ------IKVTPQDRLSQQICHACISYLNSWQSFKNRCF------------------SSQAKQRQW 155
                  :.:...|.|.|:||..|::.......|:.:|.                  :.|||::| 
  Fly   210 EMTIWMLNINRDDGLPQEICRQCMAQFLMVAKFRRKCVRMQQRLQDFAQEISDRQTARQAKRQQ- 273

  Fly   156 LDTNKSKLLNYLDLNSAENGGGGFFDQHLHQQQQHHQHLENELE-------AEKEKATPTAASTA 213
             ...|.....:|.|...         .|..||....:.:.:|.:       |..|.||.||.:.|
  Fly   274 -KVQKKTHDRWLQLEPT---------SHEEQQPIRKRRMVSESDGDSTAAAAAAEAATATATTPA 328

  Fly   214 ANILDGIHSLKKRKSLTVYVSPKPQQMQQHQLQQL----QLQPPARMTATISSAQQSLQTLLLQV 274
            ..:.....||...|       |.|||.:..:.:.|    :::.||   |:|:::....:|...:.
  Fly   329 KQVRTDFESLPPPK-------PSPQQHRVRKYRTLSIDCEMERPA---ASINASSMPWKTKAARK 383

  Fly   275 PASA--AASCSST------STSTTSASQQR-----------EQQQHQQRQQSHQYRRYHHHHQQQ 320
            ..|.  |:|||:.      ..|:||:|:..           |...:.....:...|......||.
  Fly   384 ELSENWASSCSTAVMSPNRQRSSTSSSEHMSDLSVGPCCGFESDSNPSSTSNSARRTVILVKQQS 448

  Fly   321 QQQQQQQHNQRGKQMLPHHQQHQQQHHRRQRQFRPQRPLPVPVVNPA-----------PTLRKFK 374
            .::....::     ::|.               |.:||...|:..||           |..||.:
  Fly   449 PEKTSPMYD-----LMPR---------------RGRRPRKAPIYMPAKRQRRSLVRKEPLYRKAQ 493

  Fly   375 P----------KLYLPLDITVPPLPPL--PTIPSIPTLPPVGPGSIAPPPAAELLPGISGVAGMV 427
            |          |...|.:..:..|.|.  ..|.|....|.....::......|:.     :.|::
  Fly   494 PVNEENKKSDQKDIYPKESRMEGLAPSCDEAIDSTSDAPMEVASNVVQKKCDEIC-----LNGLI 553

  Fly   428 ESLS----------------------LSLPLDFSQSCSSSGHV------------QHQQAGGLAT 458
            :|.:                      |:|.:..::..:|...:            ..|.|..:..
  Fly   554 DSRNQLGAMEMEPVNEMIASNGVDKELTLSVQNNKETTSEEQIFEATSVIKESVQPEQSAEDIQV 618

  Fly   459 ST---TTSNPPGSVVSATPSASVSASASASASVSTAPLLMPPLPAMPIKD-----EPIDTDDDYQ 515
            .|   :.:|...:......|..:::|...|.|   .|..:..|.:|..::     :.::..:..|
  Fly   619 RTEIESIANDIRAEADLVQSEELTSSTETSES---QPKAVEQLESMGKQESYALPQNMEAHESVQ 680

  Fly   516 M-KSIDESDDMVDPTMFLERSEHEGDVPLTASDYDYTAQHGVNASSVAASLPPNAVANVAAAGDS 579
            . :::||||.       .::.|....:||...|.:...:..|:..:.||                
  Fly   681 QTQTVDESDS-------ADQREIIVSIPLEVLDENLQRRLCVDPETEAA---------------- 722

  Fly   580 KVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPTPALAAALEMQRAAAAAATA 644
                                :.::..|..|.|..|..:|.             |.......:|||
  Fly   723 --------------------NRQSADPKEFALRPDDVNNN-------------ENDENFCQSATA 754

  Fly   645 EANRAAGAAGGNISTQKYRQVVMNAFIKCEG---GGYDYDNPEQYRPLLTRDKVEFIEQNDEFLE 706
            ::..:|.|...|               |.|.   ||.|.|:.:       .|:|..:...     
  Fly   755 DSFNSAVALRTN---------------KIEATPPGGTDSDDTD-------TDEVPIVPSG----- 792

  Fly   707 QYQTMTCRCCNKYFSTYKNFMAHVRKKYPQLPRNLCFNCLKMNDSKALFISHLKKRNCINLFRVL 771
                          .|..:|||...|                              :|.|....|
  Fly   793 --------------PTPMDFMAEFAK------------------------------HCANGIEQL 813

  Fly   772 NALRGKTTTVVVPIADDVADDGATGSIPVADAGAG---VVAMNSPTVTASGEVVTPGGGSERPEK 833
            ..    ||.|..|...|:        :|:.|..|.   .|.||....|.:|.:            
  Fly   814 KV----TTPVPSPTPSDL--------VPLNDLEAKQKLEVEMNDVETTLNGIL------------ 854

  Fly   834 LRAKELLVNKLY--ECK-----LCPKGFRTKHEFRTHV------YDKHADVQRKDNNSIQCSFCG 885
               .|:....:|  .|.     |.|..:.|..|..:.|      :::.:..:.||.......   
  Fly   855 ---NEMQDQHMYTPNCAHIDEFLTPADYATLTEQESSVSSPPNPFEQSSVAEPKDEKPSATE--- 913

  Fly   886 LDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQ----------RFLDHVYQDHLGGVGGGAVS 940
                ||.|.....|.:  |.....:.|...:||.:          :||..:.........|..|.
  Fly   914 ----DPFDNSNFTNEL--IGFQNDIPCFENIETPEEGQNLHLELTQFLRDLQPSQSDPPAGEQVE 972

  Fly   941 DNASTTGSGMARSNSMEHSPGKRSLLGALGVGSSAEESRSSSAAP---PLTSTPKLAGGNQVGGG 1002
            .....|.....:.:...:.|        :....:..::.|::.:|   |: |:|::....::...
  Fly   973 KIEMETQPSTVQMDVQSNLP--------VQAADTQPQNESANHSPFESPI-SSPQVQSQIELQME 1028

  Fly  1003 GSTSASAAAAAQSSANRDASAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKC 1067
            ...........::....|..:.:|      ||         |:...|..|.:|:..:::|     
  Fly  1029 PQIETQMQPQIETRMQHDVLSVQS------PQ---------NHQPQVQSHDQSQMQHQIP----- 1073

  Fly  1068 VRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNAD-----AVKLADGSTPNVYTG------ 1121
                   |:|    |..|.|    :|:.....:.:..|.     .|:|.....|:|.|.      
  Fly  1074 -------PQI----EPQIEV----QNQEQNTLQLVPQAQHQVVPHVQLQSQLVPHVQTQGTTTTV 1123

  Fly  1122 RYDYVMK---------------DLMSITNGG--------TLDDEEEE------------------ 1145
            .|:.:.:               .::|:.:.|        |...::::                  
  Fly  1124 TYEQIYQQHIVQQTVQQSSNKMQVISLPSAGSETTRQWQTQQSQQQQQVQWSSVGGLEAIKSAPV 1188

  Fly  1146 ------------------PGSVAKKMRLDDSSNNSSLV-GVASQQKECPICNAVFSNNIGLS--N 1189
                              |........|..:||.|.:: .|..||:.|       ...|.:|  .
  Fly  1189 ESVAPTTTTYYISASDLYPQQTETYTMLQPASNESYVIEQVNHQQQHC-------QQQIQMSQQQ 1246

  Fly  1190 HMRSHY-------------------------TASNAVNAALAAANRMTPKSL------------- 1216
            |.|.|.                         :|||...|.|...|..|...:             
  Fly  1247 HQRQHQQQQAQQQQQPIMILIQQPEIQQPVASASNPQQAPLHIYNAATSNDVHQMQHTQRQQIRQ 1311

  Fly  1217 -----------------TITATPATDSELGVGGTMSESAPATPANVPPAMANQTPQEQAVFRRSL 1264
                             .:.:.|.    ||:.|..|.|...||  :|...|...|          
  Fly  1312 QYQHQQYQRLQQPQQTRVVQSHPV----LGMPGATSISTKVTP--IPVTAARGRP---------- 1360

  Fly  1265 DQAADRRFRRMRCRICQR--RFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFK 1327
                    ..::||.|..  ||||...|..|::..|..  |....|..|...||.......|:..
  Fly  1361 --------LTLKCRFCHNGPRFSSSLEYSRHIIDLHPA--VAPFNCPHCPMAFAGRTKRSQHILS 1415

  Fly  1328 VHGKAIKDEMIIKQFECDVCSIVYSSESELQQHKRSVHKLTSASASTSASTSSKIDDDSLM---- 1388
            .|        :::|::|..||.|:.::..|..|.:..|    .:..|..|.:.|::|..|.    
  Fly  1416 HH--------VVQQYQCGQCSHVFPAQKALDVHIQRFH----MTLKTDPSGAVKVEDVQLQITSE 1468

  Fly  1389 --DDGKPTSSDLADLSTLAAGGSTASAPLYWYQCKYCPSNFNTNKKLAI--------------HI 1437
              ..|:|....|               .|..:|       ....:||.:              ..
  Fly  1469 RRPRGRPYKPRL---------------QLQQHQ-------LQPQQKLQVQQHQQQQKALQQLPQA 1511

  Fly  1438 NSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKH----------------PQVPNPAECSLCRKV 1486
            ..|.:........:....|...:..:...::::|                ||.|:|:...:    
  Fly  1512 QHHQQQQQPQLQQEVLQQVQQLQVQVQPQQHQQHQQVLQVQQPQQQPLMQPQSPHPSTVEM---- 1572

  Fly  1487 FFDRQMHDNHTPTCNRKPITSTGAHQQQDGQLHSHH---------------TAKRTIF------- 1529
                    ..:||..||.:..........|..|::.               |...||.       
  Fly  1573 --------QASPTTPRKILCCPDCEDCTSGHSHANEQFEELQTLQAPPTVLTPPSTIVSVPSPQP 1629

  Fly  1530 ----RHKTGDDDDEEDDDEQQQLEERANSDGNGTTVG----------VASGSTAAAGTSLKI-RI 1579
                :|.|....::.:.|....|.:...   .|..||          |||.|.:::.:|..: .|
  Fly  1630 MVYSQHITMPSPEQSEPDSTTTLRQYRK---RGVIVGPQGPLHLATPVASPSPSSSPSSSTVDHI 1691

  Fly  1580 PEVA-----------------------------CTICGARFTDQEHFSK---------------- 1599
            |..:                             |..|..|||::....|                
  Fly  1692 PPASPATPASPAPPPSPAVASTVQVSELRTSHHCLYCEERFTNEISLKKHHQLAHGALTTMPYVC 1756

  Fly  1600 ---------------HIQKHEQE--LYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKT 1647
                           |::.|:.|  .|..|.....| ..|:.....::.....:..:.||.|.|.
  Fly  1757 TICKRGYRMRTALHRHMESHDVEGRPYECNICRVRF-PRPSQLTLHKITVHLLSKPHTCDECGKQ 1820

  Fly  1648 FPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTTNNNNNNSMHLRELHAVGLMPNQQQQSL 1712
            |....|||.|.|:|           ||.      .:..:..:....:|:||.             
  Fly  1821 FGTESALKTHIKFH-----------GEL------GYQCDGCDRTFEYLKELR------------- 1855

  Fly  1713 NNSCNSSMNHNNNSSSNRSKSMKRKRELKCEYCASTFISNNNLRRHM 1759
                    .|....|         :...||::|.|:|:...|.|.||
  Fly  1856 --------KHRRTHS---------EMFYKCKFCPSSFMRFTNFRAHM 1885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hangNP_001138204.1 zf-AD 80..154 CDD:285071 16/112 (14%)
C2H2 Zn finger 1036..1057 CDD:275368 4/20 (20%)
C2H2 Zn finger 1067..1088 CDD:275368 4/20 (20%)
C2H2 Zn finger 1279..1298 CDD:275371 7/20 (35%)
C2H2 Zn finger 1308..1325 CDD:275371 4/16 (25%)
C2H2 Zn finger 1420..1440 CDD:275368 2/33 (6%)
C2H2 Zn finger 1450..1468 CDD:275368 1/17 (6%)
mldNP_001247289.1 zf-AD 186..255 CDD:214871 10/68 (15%)
C2H2 Zn finger 1365..1388 CDD:275368 9/22 (41%)
C2H2 Zn finger 1396..1416 CDD:275368 5/19 (26%)
C2H2 Zn finger 1424..1445 CDD:275368 6/20 (30%)
C2H2 Zn finger 1725..1746 CDD:275368 6/20 (30%)
C2H2 Zn finger 1756..1776 CDD:275368 1/19 (5%)
C2H2 Zn finger 1785..1806 CDD:275368 3/21 (14%)
C2H2 Zn finger 1814..1834 CDD:275368 10/19 (53%)
zf-C2H2 1839..1861 CDD:278523 4/42 (10%)
C2H2 Zn finger 1841..1861 CDD:275368 4/40 (10%)
C2H2 Zn finger 1868..1888 CDD:275368 8/18 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439971
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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