DRSC/TRiP Functional Genomics Resources

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Protein Alignment hang and Zfp438

DIOPT Version :9

Sequence 1:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_001347376.1 Gene:Zfp438 / 240186 MGIID:2444919 Length:798 Species:Mus musculus


Alignment Length:786 Identity:142/786 - (18%)
Similarity:245/786 - (31%) Gaps:287/786 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   756 ISHLKKRNCINLFRVLNALRGKTTTVVVPIADDVADDGATGSIPVADAGAGVVAMNSPTVTASGE 820
            :|.|...:|.:|  .|:|:...||          .|..:..|:|.:...||.....:||      
Mouse   198 LSPLVTNSCGDL--ELSAMPVYTT----------EDSSSQQSLPASMQKAGCARKEAPT------ 244

  Fly   821 VVTPGGGSE--RPEKLRAKELLVNKLYECKLCPKGF-------RTKHEFRTHVYDKHADVQRKDN 876
              ||...||  :.:...|:.:|.:.:....:.|||.       |.|   .|.|....:|.   ||
Mouse   245 --TPAIASEELKEQLASAQTVLSSAVQLLSVVPKGKLPILPLPRVK---TTEVGKVESDA---DN 301

  Fly   877 NSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQ--DHLGGVGGGAV 939
            ..:..|.|..:                        ||.:|...:.| |...:  ..:..:.|...
Mouse   302 AELSLSGCRAN------------------------CDERLSITEGF-DAATEIASKIAALHGSKQ 341

  Fly   940 S--------------DNASTTGSGMARSNSMEHSP-------GKR--SLLGALGVG-----SSAE 976
            |              .:.:...||:.|.......|       |||  .::|..|.|     :|.:
Mouse   342 SACESAFCPVTKLDLSHKAKPSSGIKRRGRKWKVPDEILALQGKRRKCIIGMCGDGIERARNSPQ 406

  Fly   977 ESRSS--------------------SAAPPLTS-TPKLAGGNQVGGGGSTSASAAAAAQSSANRD 1020
            |:|..                    ||..||.| |..|:......|....:.:..:....|...|
Mouse   407 EARDQKPRVASRKYRNIMPKPVLVLSALAPLASHTAVLSQAPSSLGQDVLNNALPSKCLGSKQSD 471

  Fly  1021 ASAPKSQY-----FSRMPQ---VCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRI 1077
            :|.||...     ||.:.:   :||:|...:...:::|.||.: |.|:.|  |.|..|     |.
Mouse   472 SSTPKPSSVLRNGFSGIKKPWHMCPVCNYHFQFKHHLLDHMNT-HTNRRP--YSCGIC-----RK 528

  Fly  1078 SYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDE 1142
            :|:|                                                             
Mouse   529 TYVR------------------------------------------------------------- 532

  Fly  1143 EEEPGSVAKKMRLDDSSNN-SSLVGVASQQKECPICNAVFSNNIGLSNHMRSHYTASNAVNAALA 1206
               |||::..|:|....|: ..||.       |..|..||       .|:|.::       ..|.
Mouse   533 ---PGSLSAHMKLHHGDNHPKKLVC-------CEFCAKVF-------GHVRVYF-------GHLK 573

  Fly  1207 AANRMTPKSLTITATPATDSELGVGGTMSESAPATPANVPPAMANQTPQEQAVFRRSLDQAADRR 1271
            ..:|:      :.:|..:.|||..|.|             |...|:.|..|..     |.:.:| 
Mouse   574 EVHRV------VISTEPSPSELQPGDT-------------PKNKNRDPGMQGP-----DNSLER- 613

  Fly  1272 FRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIK-- 1334
                     :.:.|.::.:..:...:.::|    |:|..|.........:|.||..|||:.|:  
Mouse   614 ---------ETKSSLEEDFLLNQADEVKLQ----IRCGRCQITAQSFAEIKFHLLHVHGEEIQGR 665

  Fly  1335 -DEMIIKQFECDVCSIVYSSESELQQHKRSVHKLTSASASTSASTSSKID------DDSLMDDGK 1392
             .|||:.....|.     ..:.:..:.::.:....|...|.:.....::.      :::|:.   
Mouse   666 LQEMILPGSRSDA-----PHQKQYTERRKQMKPYASLEDSPAFPRVKRLPAPHQNREEALVG--- 722

  Fly  1393 PTSSDLADLSTLAAGGSTASAPLYW----YQCKYCPSNFNTNKKLAIH-INSHDEFDSNDYSCKD 1452
                  ::.......||...|.|.|    :.|..|.......:.|.:| ::.|        :|:|
Mouse   723 ------SEGGQWGMAGSQHPAKLLWSHTGFNCLLCAQMLGRKEDLLLHWVHKH--------NCED 773

  Fly  1453 CGNVYS 1458
            ...:::
Mouse   774 PSRLWA 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368 6/20 (30%)
C2H2 Zn finger 1067..1088 CDD:275368 5/20 (25%)
C2H2 Zn finger 1279..1298 CDD:275371 1/18 (6%)
C2H2 Zn finger 1308..1325 CDD:275371 3/16 (19%)
C2H2 Zn finger 1420..1440 CDD:275368 4/20 (20%)
C2H2 Zn finger 1450..1468 CDD:275368 2/9 (22%)
Zfp438NP_001347376.1 C2H2 Zn finger 495..515 CDD:275368 6/20 (30%)
zf-H2C2_2 507..532 CDD:372612 11/32 (34%)
zf-C2H2 521..543 CDD:333835 10/90 (11%)
C2H2 Zn finger 523..543 CDD:275368 9/88 (10%)
C2H2 Zn finger 554..573 CDD:275368 6/39 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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