DRSC/TRiP Functional Genomics Resources

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Protein Alignment hang and Thbs3

DIOPT Version :9

Sequence 1:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_038719.2 Gene:Thbs3 / 21827 MGIID:98739 Length:956 Species:Mus musculus


Alignment Length:623 Identity:127/623 - (20%)
Similarity:199/623 - (31%) Gaps:237/623 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1577 IRIPEVACTICGARFTDQEHFSKHIQKHEQELYVD-NPLAAMFD-----------DGPADAGQFQ 1629
            ||...:.|.:||.              |||..:.. :|.....|           .||...|   
Mouse   259 IRNTIMECQVCGF--------------HEQRSHCSPSPCFRGVDCMEVYEYPGYRCGPCPPG--- 306

  Fly  1630 VERQNENGEYACDL--CAKTFPQVIALKVHRKWHFRGDSKQNPIDG----------EATQLTNNN 1682
               ...||.:..|:  ||...|           .|.|.|..|.:.|          :.|:::   
Mouse   307 ---LQGNGTHCDDINECAHADP-----------CFPGSSCINTMPGFHCEACPPGYKGTRVS--- 354

  Fly  1683 HTTNNNNNNSMHLRELHAVGLMPNQQQQSLNNSCNSSMNHNNNSSSNRSKSMKRKRELKCEYCAS 1747
                             .||:...:..:.:.|..:...:.||......|.........||..|..
Mouse   355 -----------------GVGIDYARASKQVCNDIDECNDGNNGGCDPNSICTNTVGSFKCGPCRL 402

  Fly  1748 TFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLTCRRCQLKFDTKELWIEHKLADAKV-VRPF 1811
            .|:.|.:                        ...:..|.|            |..|.:.. :...
Mouse   403 GFLGNQS------------------------QGCVPARTC------------HSPAHSPCHIHAH 431

  Fly  1812 CPFQ------------W--GCDLCGE------YLSRKEKLMNHINNHLKEE--VIVPVATKAAIE 1854
            |.|:            |  ..::||.      |..:....|:: |.|.|::  ::.|        
Mouse   432 CLFERNGAVSCQCNVGWAGNGNVCGPDTDIDGYPDQALPCMDN-NKHCKQDNCLLTP-------- 487

  Fly  1855 RTAAMESAAADANAAATLSALGEGAETEDQFAEKVEAAGATTTDKLTNPDE-------EDSDDLD 1912
             .:..|.|..|          |.|.:.:|      :|.|    |.:.|.::       :|..:.|
Mouse   488 -NSGQEDADND----------GVGDQCDD------DADG----DGIKNVEDNCRLFPNKDQQNSD 531

  Fly  1913 EDSSGDDDDSSGTGDDDDDDDSDDDEDGEGEDEDEEGDG---------------GEGEDEEGVQP 1962
            .||.||..|:.....::|..|:|.:.:|:..|.|.:|||               ....||:||..
Mouse   532 TDSFGDACDNCPNVPNNDQKDTDGNGEGDACDNDVDGDGIPNGLDNCPKVPNPLQTDRDEDGVGD 596

  Fly  1963 PAQLLPQQQHKTDLNLNQDDDDLVEEVISSDDDEDDDG---------------EVESDDD---DE 2009
            .....|:..:.|..:.   |.|||.:|..:::|.|.||               :::||:|   ||
Mouse   597 ACDSCPEMSNPTQTDA---DSDLVGDVCDTNEDSDGDGHQDTKDNCPQLPNSSQLDSDNDGLGDE 658

  Fly  2010 -DDDDEEDDVEE---PEPVGLTVRPLMNGKSKMPPLIVASSDDEDDGVMPIEDIIEEEFDEDADP 2070
             |.||:.|.|.:   |.|....:.|..|.|           |.:.:||   .|:.|::||.||..
Mouse   659 CDGDDDNDGVPDYIPPGPDNCRLVPNPNQK-----------DSDGNGV---GDVCEDDFDNDAVV 709

  Fly  2071 DPEDAIEEVDEDDL------------DEGEVEDEPNVV 2096
            ||.|...|..|..|            .||:.:.:||.|
Mouse   710 DPLDVCPESAEVTLTDFRAYQTVILDPEGDAQIDPNWV 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368
C2H2 Zn finger 1067..1088 CDD:275368
C2H2 Zn finger 1279..1298 CDD:275371
C2H2 Zn finger 1308..1325 CDD:275371
C2H2 Zn finger 1420..1440 CDD:275368
C2H2 Zn finger 1450..1468 CDD:275368
Thbs3NP_038719.2 LamG 21..193 CDD:304605
coiled coil 227..269 CDD:293925 3/9 (33%)
TSP-3cc 227..269 CDD:293925 3/9 (33%)
EGF_CA 316..352 CDD:238011 9/46 (20%)
EGF_3 378..407 CDD:289699 7/28 (25%)
TSP type-3 1 457..491 6/43 (14%)
TSP3 repeat_1C 457..491 CDD:275367 6/43 (14%)
TSP type-3 2 492..527 10/54 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 518..537 4/18 (22%)
TSP type-3 3 528..550 6/21 (29%)
TSP3 repeat_short 528..550 CDD:275365 6/21 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..699 43/169 (25%)
TSP3 repeat_long 551..586 CDD:275366 8/34 (24%)
TSP_3 552..586 CDD:280556 8/33 (24%)
TSP3 repeat_short 587..609 CDD:275366 5/21 (24%)
TSP3 repeat_long 610..647 CDD:275365 9/39 (23%)
TSP_3 611..647 CDD:280556 9/38 (24%)
TSP type-3 8 688..723 15/48 (31%)
TSP_3 689..722 CDD:280556 14/35 (40%)
TSP_C 741..938 CDD:283408 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.946395 Normalized mean entropy S6202
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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