DRSC/TRiP Functional Genomics Resources

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Protein Alignment hang and F56D1.1

DIOPT Version :9

Sequence 1:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_495042.3 Gene:F56D1.1 / 186375 WormBaseID:WBGene00018959 Length:454 Species:Caenorhabditis elegans


Alignment Length:543 Identity:102/543 - (18%)
Similarity:181/543 - (33%) Gaps:165/543 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1372 ASTSASTSSKIDDDSLMDDGKPTSS---------------DLADLSTLAAGGSTASAPLYWYQCK 1421
            :|:|:|:....||:...:||....|               ::|  |.....|.|...   ::.|.
 Worm     9 SSSSSSSDEDSDDEYREEDGNSERSNSKVCIEEVEEVEKEEIA--SRKRKRGKTKDE---FHPCP 68

  Fly  1422 YCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNV--YSGRKSLWVHRYKKHPQVPNPAECSLC- 1483
            :|...|....||..||..|   |||.|.|.:|..:  :.....|..|....|.:..:  :|..| 
 Worm    69 FCEKKFRYPNKLREHIKIH---DSNRYQCLECSTITKFGTYGELRAHHKLHHSKASH--KCPQCS 128

  Fly  1484 ----RKVFFDRQMHDNHTPTCNRKPITSTG-----AHQQQDGQLHSHHTA--------------- 1524
                :..|..|....||.   :..|.|.||     |..:....:..:||:               
 Worm   129 YTNEKPAFIRRHFEQNHV---DGIPCTITGCCIKVAKNRLKAHIKEYHTSIPLSTEQTRSKLSFN 190

  Fly  1525 KRTIFRHKTGDDDDEEDDDEQQQ--LEERANSDGNGTTVGVASGSTAAAGTSLKIRIPE----VA 1583
            |..:..:|   .|..:||.||||  ||:...                        ||.|    ..
 Worm   191 KCPLCEYK---PDVSDDDPEQQQKDLEDHVQ------------------------RIHEEREPAL 228

  Fly  1584 CTI-CGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKT 1647
            ||: ||. :......|:|:          :..:::..:.|: :.|.....||:            
 Worm   229 CTLGCGV-YLGSGSVSEHL----------STCSSLIQNIPS-SSQSTPALQND------------ 269

  Fly  1648 FPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTTNNNNNNSMHLRELHAVGLMPNQQQQSL 1712
                       :|:   |:              |..||.:....:....|..:|..:.|...:::
 Worm   270 -----------EWN---DA--------------NTETTLSTITGTSSQFERDSVSEVTNDLSENI 306

  Fly  1713 NNSCNSSMNHNNNSSSNRSKSMKRKR---ELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPP 1774
            |: .:..:........|:.:...|.|   :..||.|..||...:|||:|:...|......:.:..
 Worm   307 ND-IDEEIEFGTTEPPNKIRKHSRSRVHGDFSCEICLKTFTLRDNLRKHVRVYHSENSQKVVKST 370

  Fly  1775 VIVVDDHLTCRR---------CQLKFDTKELWIEH-KLADAKVVRPFCPFQWGCDLCGEYLSRKE 1829
            .....:...|.|         |...|.|::...:| .:.|.  ::|:     .|..|.:....::
 Worm   371 GPKHQEQYKCDRKSKDGDETTCGKTFRTEQALHDHFNVHDG--IKPY-----SCHTCNQKFHARD 428

  Fly  1830 KLMNHINNHLK---EEVIVPVAT 1849
            :...|::.:.:   :::...|||
 Worm   429 RFAVHLSKYHQTSIKDLTARVAT 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368
C2H2 Zn finger 1067..1088 CDD:275368
C2H2 Zn finger 1279..1298 CDD:275371
C2H2 Zn finger 1308..1325 CDD:275371
C2H2 Zn finger 1420..1440 CDD:275368 7/19 (37%)
C2H2 Zn finger 1450..1468 CDD:275368 4/19 (21%)
F56D1.1NP_495042.3 C2H2 Zn finger 67..87 CDD:275368 7/19 (37%)
C2H2 Zn finger 94..116 CDD:275368 4/21 (19%)
C2H2 Zn finger 338..359 CDD:275368 9/20 (45%)
C2H2 Zn finger 380..409 CDD:275368 6/28 (21%)
C2H2 Zn finger 417..434 CDD:275368 2/16 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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