DRSC/TRiP Functional Genomics Resources

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Protein Alignment hang and F56D1.1

DIOPT Version :10

Sequence 1:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_495042.3 Gene:F56D1.1 / 186375 WormBaseID:WBGene00018959 Length:454 Species:Caenorhabditis elegans


Alignment Length:543 Identity:102/543 - (18%)
Similarity:181/543 - (33%) Gaps:165/543 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1372 ASTSASTSSKIDDDSLMDDGKPTSS---------------DLADLSTLAAGGSTASAPLYWYQCK 1421
            :|:|:|:....||:...:||....|               ::|  |.....|.|...   ::.|.
 Worm     9 SSSSSSSDEDSDDEYREEDGNSERSNSKVCIEEVEEVEKEEIA--SRKRKRGKTKDE---FHPCP 68

  Fly  1422 YCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNV--YSGRKSLWVHRYKKHPQVPNPAECSLC- 1483
            :|...|....||..||..|   |||.|.|.:|..:  :.....|..|....|.:..:  :|..| 
 Worm    69 FCEKKFRYPNKLREHIKIH---DSNRYQCLECSTITKFGTYGELRAHHKLHHSKASH--KCPQCS 128

  Fly  1484 ----RKVFFDRQMHDNHTPTCNRKPITSTG-----AHQQQDGQLHSHHTA--------------- 1524
                :..|..|....||.   :..|.|.||     |..:....:..:||:               
 Worm   129 YTNEKPAFIRRHFEQNHV---DGIPCTITGCCIKVAKNRLKAHIKEYHTSIPLSTEQTRSKLSFN 190

  Fly  1525 KRTIFRHKTGDDDDEEDDDEQQQ--LEERANSDGNGTTVGVASGSTAAAGTSLKIRIPE----VA 1583
            |..:..:|   .|..:||.||||  ||:...                        ||.|    ..
 Worm   191 KCPLCEYK---PDVSDDDPEQQQKDLEDHVQ------------------------RIHEEREPAL 228

  Fly  1584 CTI-CGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKT 1647
            ||: ||. :......|:|:          :..:::..:.|: :.|.....||:            
 Worm   229 CTLGCGV-YLGSGSVSEHL----------STCSSLIQNIPS-SSQSTPALQND------------ 269

  Fly  1648 FPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTTNNNNNNSMHLRELHAVGLMPNQQQQSL 1712
                       :|:   |:              |..||.:....:....|..:|..:.|...:::
 Worm   270 -----------EWN---DA--------------NTETTLSTITGTSSQFERDSVSEVTNDLSENI 306

  Fly  1713 NNSCNSSMNHNNNSSSNRSKSMKRKR---ELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPP 1774
            |: .:..:........|:.:...|.|   :..||.|..||...:|||:|:...|......:.:..
 Worm   307 ND-IDEEIEFGTTEPPNKIRKHSRSRVHGDFSCEICLKTFTLRDNLRKHVRVYHSENSQKVVKST 370

  Fly  1775 VIVVDDHLTCRR---------CQLKFDTKELWIEH-KLADAKVVRPFCPFQWGCDLCGEYLSRKE 1829
            .....:...|.|         |...|.|::...:| .:.|.  ::|:     .|..|.:....::
 Worm   371 GPKHQEQYKCDRKSKDGDETTCGKTFRTEQALHDHFNVHDG--IKPY-----SCHTCNQKFHARD 428

  Fly  1830 KLMNHINNHLK---EEVIVPVAT 1849
            :...|::.:.:   :::...|||
 Worm   429 RFAVHLSKYHQTSIKDLTARVAT 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hangNP_001138204.1 zf-AD 80..154 CDD:462262
C2H2 Zn finger 1036..1057 CDD:275368
C2H2 Zn finger 1067..1088 CDD:275368
C2H2 Zn finger 1279..1298 CDD:275371
C2H2 Zn finger 1308..1325 CDD:275371
C2H2 Zn finger 1420..1440 CDD:275368 7/19 (37%)
C2H2 Zn finger 1450..1468 CDD:275368 4/19 (21%)
F56D1.1NP_495042.3 C2H2 Zn finger 67..87 CDD:275368 7/19 (37%)
C2H2 Zn finger 94..116 CDD:275368 4/21 (19%)
C2H2 Zn finger 338..359 CDD:275368 9/20 (45%)
C2H2 Zn finger 380..409 CDD:275368 6/28 (21%)
C2H2 Zn finger 417..434 CDD:275368 2/16 (13%)
Blue background indicates that the domain is not in the aligned region.

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