DRSC/TRiP Functional Genomics Resources

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Protein Alignment hang and M03D4.4

DIOPT Version :9

Sequence 1:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_001023313.1 Gene:M03D4.4 / 177375 WormBaseID:WBGene00019751 Length:505 Species:Caenorhabditis elegans


Alignment Length:549 Identity:99/549 - (18%)
Similarity:169/549 - (30%) Gaps:200/549 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1344 CDVCSIVYSSESELQQHKRSVHKLTSA----------SASTSASTSSKIDDDSLMDDGKPTSSDL 1398
            |..||..:.|..|||:|:|..|:....          .:...|....||:|...:.|   |.|..
 Worm     7 CRDCSGAFHSLDELQRHEREEHETVEQGDQEEDRMEDDSDELAMIKIKIEDSDFLSD---TDSSQ 68

  Fly  1399 ADLSTLAAGGSTASAPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSL 1463
            ..::.......::|.....|:|:.|...|...::||.|:..|.  ....:||..||..:..|:.|
 Worm    69 LSMNPTTPSEKSSSGEKGRYECEDCHEMFAVKRELATHMRIHS--GEQPHSCTQCGKEFGTRQLL 131

  Fly  1464 ---WV-HRYKKHPQVPN----------------------PAECSLCRKVF---FDRQMH------ 1493
               |: |..::....|:                      |.||..|.|.|   ||...|      
 Worm   132 KKHWMWHTGERSHVCPHCNKAFFQKGHLTQHLMIHSGGRPHECPQCHKTFIFKFDLNRHMKIHQE 196

  Fly  1494 ------------------DNHTPTCNRKP-------ITST---GAH------------------- 1511
                              |.|...|..||       :|.|   |..                   
 Worm   197 RGFSCQQCGRSFLKQVMLDEHHLKCKGKPSSPIRSLLTPTMKAGLESAISIKPPQESMILSSETI 261

  Fly  1512 ---------QQQDGQLHSHHTAKRTIFRHKTGDDDDEEDDDEQQQLEERANSDGNGTTVGVASGS 1567
                     |||:    :|..|..|:.               .:|.|...|::.|..: .:.:||
 Worm   262 AKMAQKLLIQQQE----NHRNALNTLL---------------VKQHENILNNNNNNES-NILNGS 306

  Fly  1568 TAAAGTSLKIRIPEV----ACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQF 1628
            ........:|..|.:    .|.||.::|..|..|:.|:..|                        
 Worm   307 VMHKDAGFEIPAPTIPLSLTCMICKSQFNSQPSFTLHMYMH------------------------ 347

  Fly  1629 QVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQN---PIDGEATQLTNNNHTTNNNNN 1690
            .:..||.|            ..:.:..:|........|.||   |:..::...|:.:..::....
 Worm   348 HIANQNPN------------LSIDSTHIHHTHQPTTISHQNDPTPLGSDSDLATDTSCASSPQKT 400

  Fly  1691 NSMHLRELHAVGLMPNQQQQSLNNSC--NSSMNHNNNSSSNRSKSMKRKRELKCEYCASTFISNN 1753
            :.:.|                |.:||  .||::.:::|.::...:........|:.|.:::...:
 Worm   401 SPLQL----------------LESSCLEQSSVSPSSSSGASPQPTASESSTSSCKDCTNSWQRVH 449

  Fly  1754 NLRRHM------YELHKH-------EVSN 1769
            :|.:.|      :|.:|.       .|||
 Worm   450 DLEQQMVKKDEEFENYKQMTKQIIANVSN 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368
C2H2 Zn finger 1067..1088 CDD:275368
C2H2 Zn finger 1279..1298 CDD:275371
C2H2 Zn finger 1308..1325 CDD:275371
C2H2 Zn finger 1420..1440 CDD:275368 6/19 (32%)
C2H2 Zn finger 1450..1468 CDD:275368 7/21 (33%)
M03D4.4NP_001023313.1 C2H2 Zn finger 90..110 CDD:275368 6/19 (32%)
zf-H2C2_2 102..127 CDD:290200 8/26 (31%)
C2H2 Zn finger 118..138 CDD:275368 6/19 (32%)
C2H2 Zn finger 146..166 CDD:275368 1/19 (5%)
zf-H2C2_2 158..181 CDD:290200 5/22 (23%)
zf-C2H2 172..194 CDD:278523 8/21 (38%)
C2H2 Zn finger 174..194 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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