DRSC/TRiP Functional Genomics Resources

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Protein Alignment hang and ztf-29

DIOPT Version :9

Sequence 1:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_499490.1 Gene:ztf-29 / 176585 WormBaseID:WBGene00013438 Length:343 Species:Caenorhabditis elegans


Alignment Length:477 Identity:82/477 - (17%)
Similarity:153/477 - (32%) Gaps:176/477 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1629 QVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTTNNNNNNSM 1693
            :::|.:..||:.|..|.|||....:|..|| .:|.||.:|..:                      
 Worm     8 ELKRPDLKGEFLCGHCGKTFCHAASLNRHR-LNFHGDDQQCLV---------------------- 49

  Fly  1694 HLRELHAVGLMPNQQQQSLNNSCNSSMNHNNNSSSNRSKSMKRKRELKCEYCASTFISNNNLRRH 1758
                                  |::.:.||:....:..|....:|...|..|..||....     
 Worm    50 ----------------------CDTKIPHNDTIRRHMQKEHNIQRVFTCGCCNWTFPDKK----- 87

  Fly  1759 MYELHKHEVSNL----PEPPVIVVDDHLTCRR------CQLKFDTKELWIEHKLADAKVVRPFCP 1813
              |||.|..|.|    |....|:.   ::.||      .:|:.:.:...|: |...:|.::....
 Worm    88 --ELHSHNNSMLKTGTPGTAKIIA---VSSRRPGSLSQHELRGEERSPRIK-KRPSSKAMKTSDT 146

  Fly  1814 FQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKAAIER-TAAMESAAADANAAATLSALGE 1877
            ...|.|   :.|:....||:......:..|..|....:.|:: .||..:......:::|.||...
 Worm   147 PLTGHD---QILALLSNLMSAQQQQQQAPVATPTIPASWIDQLLAATPALLPFMPSSSTFSASSS 208

  Fly  1878 GAETEDQFAEKVEAAGATTTDKLTNPDEEDSDDLDEDSSGDDDDSSGTGDDDDDDDSDDDEDGEG 1942
            .:|.|.                  .|:....|.:......::::::.|               .|
 Worm   209 SSEMEQ------------------TPEPSSLDTVLTSMMNNNEEAAST---------------SG 240

  Fly  1943 EDEDEEGDGGEGEDEEGVQPPAQLLPQQQHKTDLNLNQDDDDLVEEVISSDDDEDDDGEVESDDD 2007
            |.::||      |:||.|              |:::. |:.||:...:.:|              
 Worm   241 EIKEEE------EEEEEV--------------DIDIG-DEKDLLVRAVGAD-------------- 270

  Fly  2008 DEDDDDEEDDVEEPEPVGLTVRPLMNGKSKMPPLIVASSDDEDDGV--MPIEDIIEEEFDEDADP 2070
                                   .::.|::.|   :::|...:.|:  .|:.:          .|
 Worm   271 -----------------------FLSVKTEQP---ISNSMSSESGIGSAPVSN----------TP 299

  Fly  2071 DPEDAIEEVDEDDLDEGEVEDE 2092
            .|.....|..|:::|.|.|:.|
 Worm   300 SPVATSPERKEENMDVGRVKKE 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368
C2H2 Zn finger 1067..1088 CDD:275368
C2H2 Zn finger 1279..1298 CDD:275371
C2H2 Zn finger 1308..1325 CDD:275371
C2H2 Zn finger 1420..1440 CDD:275368
C2H2 Zn finger 1450..1468 CDD:275368
ztf-29NP_499490.1 COG5236 <15..>92 CDD:227561 26/128 (20%)
C2H2 Zn finger 20..40 CDD:275368 8/20 (40%)
C2H2 Zn finger 47..68 CDD:275368 4/64 (6%)
C2H2 Zn finger 76..92 CDD:275368 7/22 (32%)
U2AF_lg 112..>191 CDD:273727 16/82 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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