DRSC/TRiP Functional Genomics Resources

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Protein Alignment rumi and AT3G48980

DIOPT Version :9

Sequence 1:NP_651095.1 Gene:rumi / 326122 FlyBaseID:FBgn0086253 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001327856.1 Gene:AT3G48980 / 824059 AraportID:AT3G48980 Length:545 Species:Arabidopsis thaliana


Alignment Length:399 Identity:87/399 - (21%)
Similarity:170/399 - (42%) Gaps:64/399 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 CSA----DQKSCAQSEPDQINEDEFSFKIRRQIEKANADYKPCSSDPQDSDCSCHANVLKRDLAP 86
            |:|    |..:|.        :|.:....|....:..:|..|.::      |..:...:..||.|
plant   105 CAAFSGNDTGTCP--------KDNYPTSFRSSAGEGESDRSPSAT------CPDYFRWIHEDLRP 155

  Fly    87 YKSTGVTRQMIE-SSARYGTKYKIYGHRLY----RDANCMFPAR----CEGIEHFLLPLVATLPD 142
            ::.||:||:.:| ::|....:..|...|:|    |:|   |..|    ..|....|......:||
plant   156 WEKTGITREALERANATAIFRLAIINGRIYVEKFREA---FQTRDVFTIWGFVQLLRRYPGKIPD 217

  Fly   143 MDLIINTRDYPQLNAAWGNAAG------GPVFSFSKTKEYRDIMYPAWTFWAGGPATKLHPRGIG 201
            ::|:.:..|:|.:.||  ..||      .|:|.:....|..||::|.|::| |.....:.|    
plant   218 LELMFDCVDWPVVKAA--EFAGVDQPPPPPLFRYCANDETLDIVFPDWSYW-GWAEVNIKP---- 275

  Fly   202 RWDQMREKLEKRAAAIPWSQKRSLGFFRGSRTSDERDSLILLSRRNPELVEAQYTKNQGWKS--- 263
             |:.:.::|.:......|..:....:::|:.|         ::....:|::...::...||:   
plant   276 -WESLLKELREGNQRTKWIDREPYAYWKGNPT---------VAETRLDLMKCNLSEVYDWKARLY 330

  Fly   264 ----PKDTLDAPAADEVSFEDHCKYKYLFNFRGVAASFRLKHLFLCKSLVFHVGDEWQEFFYDQL 324
                .|::.:.....:::  ..|.::|.....|.|.|...|::..|.|:...|...:.:||...:
plant   331 KQDWVKESKEGYKQSDLA--SQCHHRYKIYIEGSAWSVSEKYILACDSVTLMVKPHYYDFFTRGM 393

  Fly   325 KPWVHYVPLKSYPSQQEYEHILSFFKKNDALAQEIAQRGYDFIWEHLRMKDIKCYWRKLLKRYVK 389
            .|..||.|:|.....:..:..:.:...:...||:|.::..:|:.:.|:|..:..|...||.:|.|
plant   394 FPGHHYWPVKEDDKCRSIKFAVDWGNLHMRKAQDIGKKASEFVQQELKMDYVYDYMFHLLIQYSK 458

  Fly   390 LLQYEVKPE 398
            ||::  |||
plant   459 LLRF--KPE 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rumiNP_651095.1 CAP10 139..394 CDD:214773 57/267 (21%)
AT3G48980NP_001327856.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 105 1.000 Domainoid score I2206
eggNOG 1 0.900 - - E1_KOG2458
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41353
Inparanoid 1 1.050 105 1.000 Inparanoid score I2117
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106728at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm985
orthoMCL 1 0.900 - - OOG6_103472
Panther 1 1.100 - - O PTHR12203
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.830

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