DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rumi and Poglut3

DIOPT Version :9

Sequence 1:NP_651095.1 Gene:rumi / 326122 FlyBaseID:FBgn0086253 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_997610.1 Gene:Poglut3 / 68304 MGIID:1923765 Length:503 Species:Mus musculus


Alignment Length:382 Identity:104/382 - (27%)
Similarity:175/382 - (45%) Gaps:42/382 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DYKPC-SSDPQ--DSDCSCHAN--VLKRDLAPYKSTGVTRQMIESSARYGTK------YKIYGHR 113
            :|..| ..|||  ....||.|:  .:::|...:.|..:.:.:.|...|:|.:      |.|..:.
Mouse   134 EYCDCPEDDPQVWQETLSCPASEPQIEQDFVSFPSINLQQMLKEVPTRFGDERGAVVHYTILNNH 198

  Fly   114 LYRDANCMFPARCEGIEHFLLPLV--ATLPDMDLIINTRDYPQLNAAWGNAAGG-PVFSFSKTKE 175
            :||.:...:.......:..||.|.  .||||::..||..|:|..:....:..|. |:.|:..:.:
Mouse   199 IYRRSLGKYTDFKMFSDEILLSLARKVTLPDLEFYINLGDWPLEHRKVNDTPGPIPIISWCGSLD 263

  Fly   176 YRDIMYPAWTFWAGGPATKLHPRGIGRWDQMREKLEKRAAAIP-WSQKRSLGFFRGSRTSDERDS 239
            .|||:.|.:..   ..:|....||:     ..:.|..:....| |..|....||||..:.:||..
Mouse   264 SRDIILPTYDV---THSTLEAMRGV-----TNDLLSVQGNTGPSWINKTEKAFFRGRDSREERLQ 320

  Fly   240 LILLSRRNPELVEAQYTKNQGWKSPKDTLDAPAADEVSFEDHCKYKYLFNFRGVAASFRLKHLFL 304
            |:|||:.||:|::|..|....::..:..|.  .|..:.|.|..||||..|..|..|::|..:|.|
Mouse   321 LVLLSKENPQLLDAGITGYFFFQEKEKELG--KAKLMGFFDFFKYKYQVNVDGTVAAYRYPYLML 383

  Fly   305 CKSLVFHVGDEWQEFFYDQLKPWVHYVPLKSYPSQQEYEHILSFFKKNDALAQEIAQRGYDFIWE 369
            ..|||......:.|.||..||||.||||:|.  :..:....:.:.|:||..|::||:.|.....:
Mouse   384 GDSLVLKQESPYYEHFYVALKPWKHYVPIKR--NLGDLLEKVKWAKENDEEAKKIAKEGQLTARD 446

  Fly   370 HLRMKDIKCYWRKLLKRYVKL----------LQYEVKPED-----QLIYIGPKKDEL 411
            .|:...:.||:.::|::|.:.          ::...:|:|     |.....|:::||
Mouse   447 LLQPPRLYCYYYRVLQKYAERQASKPMIRDGMELVPQPDDGTSICQCHRRRPEREEL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rumiNP_651095.1 CAP10 139..394 CDD:214773 78/266 (29%)
Poglut3NP_997610.1 Filamin. /evidence=ECO:0000255|PROSITE-ProRule:PRU00087 19..129
Filamin 22..126 CDD:279024
IG_FLMN 24..128 CDD:214720
Glyco_transf_90 147..481 CDD:304992 93/345 (27%)
Prevents secretion from ER. /evidence=ECO:0000255|PROSITE-ProRule:PRU10138 500..503 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2458
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.