DRSC/TRiP Functional Genomics Resources

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Protein Alignment rumi and Poglut3

DIOPT Version :9

Sequence 1:NP_651095.1 Gene:rumi / 326122 FlyBaseID:FBgn0086253 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001020294.3 Gene:Poglut3 / 315664 RGDID:1562027 Length:508 Species:Rattus norvegicus


Alignment Length:382 Identity:104/382 - (27%)
Similarity:175/382 - (45%) Gaps:42/382 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DYKPC-SSDPQ--DSDCSCHAN--VLKRDLAPYKSTGVTRQMIESSARYGTK------YKIYGHR 113
            :|..| ..|||  ....||.||  .:::|...:.|..:.:.:.|...|:|.:      |.|..:.
  Rat   139 EYCDCPEDDPQAWQKTLSCPANEPQIEQDFISFPSINLQQMLKEVPKRFGDERGAIVHYTILNNH 203

  Fly   114 LYRDANCMFPARCEGIEHFLLPLV--ATLPDMDLIINTRDYPQLNAAWGNAAGG-PVFSFSKTKE 175
            :||.:...:.......:..||.|.  .||||::..||..|:|..:....:..|. |:.|:..:.:
  Rat   204 IYRRSLGKYTDFKMFSDEILLSLARKVTLPDLEFYINLGDWPLEHRKVNDTPGPIPIISWCGSLD 268

  Fly   176 YRDIMYPAWTFWAGGPATKLHPRGIGRWDQMREKLEKRAAAIP-WSQKRSLGFFRGSRTSDERDS 239
            .|||:.|.:..   ..:|....||:     ..:.|..:....| |..|....||||..:.:||..
  Rat   269 SRDIILPTYDV---THSTLEAMRGV-----TNDLLSVQGNTGPSWINKTEKAFFRGRDSREERLQ 325

  Fly   240 LILLSRRNPELVEAQYTKNQGWKSPKDTLDAPAADEVSFEDHCKYKYLFNFRGVAASFRLKHLFL 304
            |:|||:.||:|::|..|....::..:..|.  .|..:.|.|..||||..|..|..|::|..:|.|
  Rat   326 LVLLSKENPQLLDAGITGYFFFQEKEKELG--KAKLMGFFDFFKYKYQVNVDGTVAAYRYPYLML 388

  Fly   305 CKSLVFHVGDEWQEFFYDQLKPWVHYVPLKSYPSQQEYEHILSFFKKNDALAQEIAQRGYDFIWE 369
            ..|||......:.|.||.:|:||.||||:|.  :..:....:.:.|:||..|:.||:.|.....:
  Rat   389 GDSLVLKQESPYYEHFYVELRPWKHYVPIKR--NLSDLLEKVKWAKENDEEAKRIAKEGQLTARD 451

  Fly   370 HLRMKDIKCYWRKLLKRYVKL----------LQYEVKPED-----QLIYIGPKKDEL 411
            .|:...:.||:.::|::|.:.          ::...:|:|     |.....|:::||
  Rat   452 LLQPPRLYCYYYRVLQKYAERQVSKPMIRDGMERVPQPDDSTSVRQCHRKRPEREEL 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rumiNP_651095.1 CAP10 139..394 CDD:214773 77/266 (29%)
Poglut3NP_001020294.3 Filamin 25..134
Filamin 27..131 CDD:279024
IG_FLMN 29..133 CDD:214720
Glyco_transf_90 152..486 CDD:304992 93/345 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 480..508 4/27 (15%)
Prevents secretion from ER. /evidence=ECO:0000255|PROSITE-ProRule:PRU10138 505..508 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2458
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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