DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rumi and Poglut1

DIOPT Version :9

Sequence 1:NP_651095.1 Gene:rumi / 326122 FlyBaseID:FBgn0086253 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_759012.1 Gene:Poglut1 / 224143 MGIID:2444232 Length:392 Species:Mus musculus


Alignment Length:364 Identity:208/364 - (57%)
Similarity:255/364 - (70%) Gaps:14/364 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 QIEKANADYKPCSSDPQDSDCSCHANVLKRDLAPYKSTGVTRQMIESSAR--YGTKYKIYGHRLY 115
            ||.:|..:|:||||    .:|||:..|::.||.|::. |::|:|:....|  .||.|:|..:||:
Mouse    38 QINRALENYEPCSS----QNCSCYHGVIEEDLTPFRG-GISRKMMAEVVRRKLGTHYQIIKNRLF 97

  Fly   116 RDANCMFPARCEGIEHFLLPLVATLPDMDLIINTRDYPQLNAAWGNAAGGPVFSFSKTKEYRDIM 180
            |:.:||||:||.|:|||:|.::..||||:::||.|||||: ..|.... .||||||||.||.|||
Mouse    98 REDDCMFPSRCSGVEHFILEVIHRLPDMEMVINVRDYPQV-PKWMEPT-IPVFSFSKTSEYHDIM 160

  Fly   181 YPAWTFWAGGPAT-KLHPRGIGRWDQMREKLEKRAAAIPWSQKRSLGFFRGSRTSDERDSLILLS 244
            |||||||.||||. .|:|.|:||||..||.|.:.||..||.:|.|..:|||||||.|||.|||||
Mouse   161 YPAWTFWEGGPAVWPLYPTGLGRWDLFREDLLRSAAQWPWEKKNSTAYFRGSRTSPERDPLILLS 225

  Fly   245 RRNPELVEAQYTKNQGWKSPKDTLDAPAADEVSFEDHCKYKYLFNFRGVAASFRLKHLFLCKSLV 309
            |:||:||:|:|||||.|||.||||..|||.:|...|||||:|||||||||||||.||||||.|||
Mouse   226 RKNPKLVDAEYTKNQAWKSMKDTLGKPAAKDVHLIDHCKYRYLFNFRGVAASFRFKHLFLCGSLV 290

  Fly   310 FHVGDEWQEFFYDQLKPWVHYVPLKSYPSQQEYEHILSFFKKNDALAQEIAQRGYDFIWEHLRMK 374
            |||||||.||||.||||||||:|:|:  .....:.:|.|.|.||.:|||||:||..||..||:|.
Mouse   291 FHVGDEWVEFFYPQLKPWVHYIPVKT--DLSNVQELLQFVKANDDIAQEIAKRGSQFIINHLQMD 353

  Fly   375 DIKCYWRKLLKRYVKLLQYEVKPEDQLIYIGPK--KDEL 411
            ||.|||..||..|.|.|.|.|........|.|:  |.||
Mouse   354 DITCYWENLLTDYSKFLSYNVTRRKDYYQIVPRRLKTEL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rumiNP_651095.1 CAP10 139..394 CDD:214773 164/255 (64%)
Poglut1NP_759012.1 Glyco_transf_90 49..388 CDD:283366 200/347 (58%)
Interaction with the consensus sequence C-X-S-X-[PA]-C in peptide substrates. /evidence=ECO:0000250|UniProtKB:Q8NBL1 103..107 3/3 (100%)
Interaction with the consensus sequence C-X-S-X-[PA]-C in peptide substrates. /evidence=ECO:0000250|UniProtKB:Q8NBL1 172..178 2/5 (40%)
UDP-glucose binding. /evidence=ECO:0000250|UniProtKB:Q8NBL1 274..279 4/4 (100%)
Prevents secretion from ER. /evidence=ECO:0000255|PROSITE-ProRule:PRU10138 389..392 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849229
Domainoid 1 1.000 404 1.000 Domainoid score I719
eggNOG 1 0.900 - - E1_KOG2458
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41353
Inparanoid 1 1.050 417 1.000 Inparanoid score I1797
Isobase 1 0.950 - 0 Normalized mean entropy S5512
OMA 1 1.010 - - QHG59845
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007017
OrthoInspector 1 1.000 - - oto95254
orthoMCL 1 0.900 - - OOG6_103472
Panther 1 1.100 - - LDO PTHR12203
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4743
SonicParanoid 1 1.000 - - X5899
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

Return to query results.
Submit another query.