DRSC/TRiP Functional Genomics Resources

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Protein Alignment rumi and poglut3

DIOPT Version :9

Sequence 1:NP_651095.1 Gene:rumi / 326122 FlyBaseID:FBgn0086253 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001120575.1 Gene:poglut3 / 100145729 XenbaseID:XB-GENE-1002530 Length:509 Species:Xenopus tropicalis


Alignment Length:421 Identity:115/421 - (27%)
Similarity:184/421 - (43%) Gaps:68/421 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PDQINEDEFSFKIRRQ----------IEKANAD-----------------YKPC-SSDPQ--DSD 72
            ||.::.::.||.:|.:          ||..:.|                 |..| ..|||  ...
 Frog    92 PDPLDRNDGSFLVRYRMYGTGNQGLMIEVLHGDKHVAQSPYTLKGPVYHEYCDCPEEDPQAWQET 156

  Fly    73 CSC---HANVLKRDLAPYKSTGVTRQMIESSARYGTK-----YKIYGHRLYRDANCMFPARCEGI 129
            .||   .|.:.| |..|:.|..:||.:.|...|:..:     |.:..:.:||.:    ..|....
 Frog   157 LSCPDTEAQISK-DFDPFPSIDLTRMLDEVPKRFADRGAIVHYTVLNNNIYRHS----MGRYTDF 216

  Fly   130 EHF---LLPLVA---TLPDMDLIINTRDYPQLNAAWGNAAGG-PVFSFSKTKEYRDIMYPAWTFW 187
            :.|   :|..:|   .|||.:..||..|:|..:....:..|. |:.|:..:.:.|||:.|.:...
 Frog   217 KMFSDEMLQSLARKVRLPDFEFYINVGDWPVEHRKANDTPGPLPMISWCGSADSRDIILPTYDIT 281

  Fly   188 AGGPATKLHPRGIGRWDQMREKLEKRAAAIP-WSQKRSLGFFRGSRTSDERDSLILLSRRNPELV 251
            .....|.   ||:     ..:.|..:....| ||.|...|||||..:.:||..|:.:||::|||:
 Frog   282 HSTLETL---RGV-----TNDLLSIQGHTGPSWSNKTEQGFFRGRDSREERLQLVHMSRKHPELL 338

  Fly   252 EAQYTKNQGWKSPKDTLDAPAADEVSFEDHCKYKYLFNFRGVAASFRLKHLFLCKSLVFHVGDEW 316
            :|..|....::..::.|.  .|..:.|.|...|||..|..|..|::|..:|.|..|||......:
 Frog   339 DAGITGYFFFRELEEELG--KASLIGFFDFFNYKYQVNVDGTVAAYRFPYLMLGDSLVLKQDSPY 401

  Fly   317 QEFFYDQLKPWVHYVPLKSYPSQQEYEHILSFFKKNDALAQEIAQRGYDFIWEHLRMKDIKCYWR 381
            .|.||..||||.||||.|.  :..:....:.:.|.:|..|::||:.|.....|.|:...:.||:.
 Frog   402 YEHFYSGLKPWKHYVPFKR--NLGDLLEKIQWAKDHDEEAKQIAKEGQTLARELLQPHRLYCYYY 464

  Fly   382 KLLKRYVKLLQYEVKPE--DQLIYIGPKKDE 410
            ||.:.|.|  :...|||  :.:.:: |:.|:
 Frog   465 KLFENYAK--RQTSKPEIRENMEHV-PQPDD 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rumiNP_651095.1 CAP10 139..394 CDD:214773 79/256 (31%)
poglut3NP_001120575.1 Filamin 32..131 CDD:366210 8/38 (21%)
Glyco_transf_90 154..487 CDD:329112 100/351 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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