DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and Hdac5

DIOPT Version :10

Sequence 1:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_063126067.1 Gene:Hdac5 / 84580 RGDID:619980 Length:1132 Species:Rattus norvegicus


Alignment Length:483 Identity:97/483 - (20%)
Similarity:162/483 - (33%) Gaps:186/483 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ERVHHEEQESEEVVWVKRDDARSA---GKLPIVFSRNYAVRFGGLERLHPFD------------- 54
            |....||::.|:.:.||.:|..|.   |......|..|...|...::|.|..             
  Rat   597 EEEEDEEEDEEDCIQVKDEDGESGPDEGADLEESSAGYKKLFADAQQLQPLQVYQAPLSLATVPH 661

  Fly    55 ----------AAKG------------KHI-------------HKLLCAQL--------------- 69
                      ||.|            ||:             |:.:|...               
  Rat   662 QALGRTQSSPAAPGSMKSPTDHPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWS 726

  Fly    70 QLDDGSFYEPTE------LTKDQLRRIHT-------------REYLKSLR--------------- 100
            :|.:.......|      .|.|:::.:|:             |:.|.|.:               
  Rat   727 RLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPC 791

  Fly   101 ----------WS---------MNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALD 146
                      |:         |.|.|:.|   :||                    .:.||:  |.
  Rat   792 GGIGVDSDTVWNEMHSSSAVRMAVGCLVE---LAF--------------------KVAAGE--LK 831

  Fly   147 YGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFNN 211
            .|:||....| ||.......|||.:..:::....|  |:...|.:::|||.|.|.|||.::.|.:
  Rat   832 NGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLL--QQKLSVGKVLIVDWDIHHGNGTQQAFYD 893

  Fly   212 VAAVYIFDMY---NAFVYPRDHVAKE---------SIRCAVELRNYT-------EDGFYLRQLKR 257
            ..:|....::   |...:|.....:|         ::..|     :|       .|..||...:.
  Rat   894 DPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVA-----WTGGVDPPIGDVEYLTAFRT 953

  Fly   258 CLMQSLAEFRPDMVVYNAGTDVLEG--DPLGNLAISAE--GVIERDRLVFSTFRALGIPVVMLLS 318
            .:|....||.||:|:.:||.|.:||  .|||..:::|.  |.:.|..:..:     |..||:.|.
  Rat   954 VVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLA-----GGRVVLALE 1013

  Fly   319 GGY-----LKASAGVITDSIVNLRLQGL 341
            ||:     ..||...:: :::::.||.|
  Rat  1014 GGHDLTAICDASEACVS-ALLSVELQPL 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 81/428 (19%)
Hdac5XP_063126067.1 None

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