DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and Hdac2

DIOPT Version :10

Sequence 1:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_063135648.1 Gene:Hdac2 / 84577 RGDID:619976 Length:491 Species:Rattus norvegicus


Alignment Length:309 Identity:80/309 - (25%)
Similarity:127/309 - (41%) Gaps:71/309 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 HPFDAAKGKHIHKLLCAQLQLDDGSF-----YEPTELTKDQLRRIHTREYLKSLRWSMNVACIAE 110
            ||....:.:..|.||     |:.|.:     |.|.:.|.:::.:.|:.||:|.||          
  Rat    29 HPMKPHRIRMTHNLL-----LNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR---------- 78

  Fly   111 VPLMAFVPNRYIQRSYLRPM-RFQ-----------------AAGSILAGKLALD---YGWAINLG 154
                :..|:.  ...|.:.| ||.                 :.|..:||.:.|:   ...|:|..
  Rat    79 ----SIRPDN--MSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWA 137

  Fly   155 GGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFNNVAAVYI-- 217
            ||.||.......|||...||.|.::.|.:..    :|::.:|:|.|.|:|.|..|.....|..  
  Rat   138 GGLHHAKKSEASGFCYVNDIVLAVLELLKYH----QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198

  Fly   218 FDMYNAFVYP-----RDHVAKESIRCAVE--LRNYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNA 275
            |..|..: :|     ||..|.:....||.  :|:..:|..|.:..|..:.:.:..::|..||...
  Rat   199 FHKYGEY-FPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQC 262

  Fly   276 GTDVLEGDPLGNLAISAEG---VIERDRLVFSTFRALGIPVVMLLSGGY 321
            |.|.|.||.||...::.:|   .:|    |..||   .:|::||..|||
  Rat   263 GADSLSGDRLGCFNLTVKGHAKCVE----VVKTF---NLPLLMLGGGGY 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 80/309 (26%)
Hdac2XP_063135648.1 None

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