DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and AT5G61050

DIOPT Version :10

Sequence 1:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_200913.1 Gene:AT5G61050 / 836226 AraportID:AT5G61050 Length:252 Species:Arabidopsis thaliana


Alignment Length:155 Identity:26/155 - (16%)
Similarity:58/155 - (37%) Gaps:31/155 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EEQESEEVVWVKRDDARSAGKLPIVFSRNYAVRF--GGLERLHPFDAAKGKHIHKLLCAQLQLDD 73
            ::...:|::| |....|      ::|.|..::.:  ||:...:|......:....|....|:..:
plant    81 DKSPPKEIMW-KTFPHR------LLFGRETSMFWGVGGVAYTNPLTNLNDQTHMCLYRITLEQFN 138

  Fly    74 GSFYEPTELTKDQ--------LRRIHTREYLKSLRWSM-----NVACIAE---VPLMAFVPNRYI 122
            ...::..||..|.        ..|:..:|...||:.:.     ||.|:.:   :|::.......:
plant   139 DLLFQENELNVDSDYPFFDLAALRLAEKEGSISLQTASDSLYGNVVCLGKEGVIPILTLTCTLSV 203

  Fly   123 QRSY------LRPMRFQAAGSILAG 141
            ...:      :||.....|.:::.|
plant   204 VEKFKSGEIPIRPPAKAYANTLIRG 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 18/113 (16%)
AT5G61050NP_200913.1 None

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