DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and HDA7

DIOPT Version :10

Sequence 1:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_198410.1 Gene:HDA7 / 833525 AraportID:AT5G35600 Length:409 Species:Arabidopsis thaliana


Alignment Length:289 Identity:68/289 - (23%)
Similarity:109/289 - (37%) Gaps:79/289 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LDDGSFYEPTELTKDQLRRIHTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLR------- 128
            |.|.|.:|          :.|:.||:..|:        :..|.....|:..:..:..|       
plant    59 LADASDFE----------KFHSLEYINFLK--------SVTPETVTDPHPSVSENLKRFNVDVDW 105

  Fly   129 --PM--------RFQAAGSI-LAGKL-ALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRL 181
              |:        |..|.||| .|.|| ..:...|||..||.||....:..||....|:.|.|:.|
plant   106 DGPVFHNLFDYCRAYAGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILEL 170

  Fly   182 FEQEPFRVRRIMIVDLDAHQGNGHERDFNNVAAVYIFDMYNAFVYPRDHVAKESIRCAVELRNYT 246
            .:.    .:|::.:::....|:..|..|.:...|..             |:...:....::.:|.
plant   171 LKS----FKRVLYIEIGFPHGDEVEEAFKDTDRVMT-------------VSFHKVGDTGDISDYG 218

  Fly   247 E----------------DGFYLRQLKRCLMQSLAE-FRPDMVVYNAGTDVLEGDPLG--NLAISA 292
            |                |.|.||.|...::....| :.|:::|...|.|.|.|||.|  ||:|..
plant   219 EGKGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKG 283

  Fly   293 EGVIERDRLVFSTFRALGIPVVMLLSGGY 321
            .|    |.|.:  .|:..:|:::|..|||
plant   284 HG----DCLQY--VRSFNVPLMILGGGGY 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 68/289 (24%)
HDA7NP_198410.1 HDAC_classI 15..322 CDD:212517 68/289 (24%)

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