DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and HDA2

DIOPT Version :9

Sequence 1:NP_001247296.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_568480.2 Gene:HDA2 / 832673 AraportID:AT5G26040 Length:387 Species:Arabidopsis thaliana


Alignment Length:312 Identity:155/312 - (49%)
Similarity:205/312 - (65%) Gaps:2/312 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRIHTREY 95
            |:.|::|.:|.:.|.|:|:|||||::|...:.|.|.:...|::.:..||.|.:|..|..:|:..|
plant    73 KVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENY 137

  Fly    96 LKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWAINLGGGFHHC 160
            |.||:.|..||.|.||..:||.||..:|:..|.|.|.|..|:|||.|||.:.|||||:|||||||
plant   138 LNSLKSSATVARITEVAPVAFFPNFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHC 202

  Fly   161 CSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFNNVAAVYIFDMYNAFV 225
            .:.||||||.:|||||.|...|.:  .|:.|:||:|||||||||||.|..:...|||.||||..:
plant   203 TAERGGGFCAFADISLCIHFAFLR--LRISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPEI 265

  Fly   226 YPRDHVAKESIRCAVELRNYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEGDPLGNLAI 290
            ||.|:.|:..|...||:.:.|....|||:|...|..:...|:|::|:||||||:|:|||||.|.|
plant   266 YPFDYRARRFIDQKVEVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKI 330

  Fly   291 SAEGVIERDRLVFSTFRALGIPVVMLLSGGYLKASAGVITDSIVNLRLQGLL 342
            |.:|:..||..||...|...||:|||.||||:|:||.||.|||.||..|||:
plant   331 SPDGITSRDEKVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLI 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_001247296.1 HDAC_classIV 51..336 CDD:212519 142/284 (50%)
HDA2NP_568480.2 HDAC_classIV 93..376 CDD:212519 142/284 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 253 1.000 Domainoid score I511
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11743
Inparanoid 1 1.050 297 1.000 Inparanoid score I803
OMA 1 1.010 - - QHG57761
OrthoDB 1 1.010 - - D1037375at2759
OrthoFinder 1 1.000 - - FOG0006007
OrthoInspector 1 1.000 - - oto4000
orthoMCL 1 0.900 - - OOG6_103672
Panther 1 1.100 - - LDO PTHR48252
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4306
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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