DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and HD1

DIOPT Version :10

Sequence 1:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_195526.1 Gene:HD1 / 829969 AraportID:AT4G38130 Length:501 Species:Arabidopsis thaliana


Alignment Length:301 Identity:78/301 - (25%)
Similarity:117/301 - (38%) Gaps:55/301 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 HPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRIHTREYLKSLRWSMNVACIAEVPLMA 115
            ||....:.:..|.||.....|......:|.......|.|.|..:|:..||              :
plant    36 HPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRFHADDYVSFLR--------------S 86

  Fly   116 FVPNRYIQRSYLRPM-RFQA-----------------AGSILAGKLALDYGW---AINLGGGFHH 159
            ..|.  .|:..:|.: ||..                 ||..:.|.:.|::|.   |||..||.||
plant    87 ITPE--TQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHGLCDIAINWAGGLHH 149

  Fly   160 CCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDF---NNVAAVYIFDMY 221
            .......|||...||.|.|:.|.:|.    .|::.||:|.|.|:|.|..|   :.|..| .|..:
plant   150 AKKCEASGFCYVNDIVLAILELLKQH----ERVLYVDIDIHHGDGVEEAFYATDRVMTV-SFHKF 209

  Fly   222 NAFVYPRDHV------AKESIRCAVELRNYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNAGTDVL 280
            ..:.....|:      :.:.....|.|.:..:|..|....|..:.:.:..|||..||...|.|.|
plant   210 GDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSL 274

  Fly   281 EGDPLGNLAISAEGVIERDRLVFSTFRALGIPVVMLLSGGY 321
            .||.||...:|.:|..|..:.:    |:..:|:::|..|||
plant   275 SGDRLGCFNLSIKGHAECVKFM----RSFNVPLLLLGGGGY 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 78/301 (26%)
HD1NP_195526.1 Arginase_HDAC 17..395 CDD:450134 78/301 (26%)

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