DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and Hdac8

DIOPT Version :9

Sequence 1:NP_001247296.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_006528338.1 Gene:Hdac8 / 70315 MGIID:1917565 Length:386 Species:Mus musculus


Alignment Length:342 Identity:74/342 - (21%)
Similarity:129/342 - (37%) Gaps:61/342 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DDARSAGKLP--IVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQ 86
            :.|.|...||  .::|..|......|.::    ..:...:|.|:.|..........:|...:.::
Mouse     6 EPANSGHSLPPVYIYSPEYVSICDSLVKV----PKRASMVHSLIEAYALHKQMRIVKPKVASMEE 66

  Fly    87 LRRIHTREYLK---------------SLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAG 136
            :...||..||:               |:.:.:...|.|...:..:.       :.:......||.
Mouse    67 MATFHTDAYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGIFDYA-------AAIGGGTITAAQ 124

  Fly   137 SILAGKLALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQ 201
            .::.||..:    |||..||:||.......|||...|..|.|:||..    :..||:.||||.|.
Mouse   125 CLIDGKCKV----AINWSGGWHHAKKDEASGFCYLNDAVLGILRLRR----KFDRILYVDLDLHH 181

  Fly   202 GNGHERDFNNVAAVYIFDM--YNAFVYPRDHVAKE---------SIRCAVELRNYTEDGFYLRQL 255
            |:|.|..|:..:.|....:  ::...:|......:         |:.  |.:::..:|..|....
Mouse   182 GDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVN--VPIQDGIQDEKYYHIC 244

  Fly   256 KRCLMQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTFRALGIPVVMLLSGG 320
            :..|.:....|.|..||...|.|.:.|||:.:..::..|:.:..:.|..    ..:..::|..||
Mouse   245 ESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQ----WQLATLILGGGG 305

  Fly   321 YLKAS--------AGVI 329
            |..|:        .|||
Mouse   306 YNLANTARCWTYLTGVI 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_001247296.1 HDAC_classIV 51..336 CDD:212519 67/313 (21%)
Hdac8XP_006528338.1 HDAC8 16..370 CDD:212524 70/332 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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