DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and phka1a

DIOPT Version :9

Sequence 1:NP_001247296.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_005166576.1 Gene:phka1a / 572183 ZFINID:ZDB-GENE-031118-56 Length:1232 Species:Danio rerio


Alignment Length:195 Identity:39/195 - (20%)
Similarity:64/195 - (32%) Gaps:64/195 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EEVVWVKRDDAR-------------------SAGKLPIVFSRNYAVRFGGLERLHPFDAAKGKHI 61
            :.||.|..||.:                   .||.|.|:....:||     |.:...:..|.:.|
Zfish   225 DSVVHVLADDIQHCQSILNSMLPRASTSKEVDAGLLSIISYPAFAV-----EDMELVNITKEEII 284

  Fly    62 HKLL----CAQLQLDDGS----------FYEPTELTKDQLRR----------------IHTREYL 96
            .||.    |.:. |.||.          :||..||...:...                |::.|.:
Zfish   285 SKLQGRYGCCRF-LRDGHKTPKEDPNRLYYESAELKLFENIECEWPLFWTYLILDGIFINSPEQV 348

  Fly    97 KSLRWSMNVACIAE------VPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWAINLGG 155
            :..|.::....|.:      :|.:..||...:...|:.|   .....|..||..|.:|.::.:.|
Zfish   349 EEYREALEGILIKQKDGIRLLPELYSVPPEKVDEEYVNP---HTVERIPLGKCPLKWGQSLYVLG 410

  Fly   156  155
            Zfish   411  410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_001247296.1 HDAC_classIV 51..336 CDD:212519 27/141 (19%)
phka1aXP_005166576.1 Glyco_hydro_15 8..>439 CDD:279112 39/195 (20%)
Glyco_hydro_15 <802..919 CDD:279112
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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