DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and hdac11

DIOPT Version :10

Sequence 1:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_021335266.2 Gene:hdac11 / 431718 ZFINID:ZDB-GENE-040704-7 Length:375 Species:Danio rerio


Alignment Length:346 Identity:166/346 - (47%)
Similarity:217/346 - (62%) Gaps:26/346 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HHEEQESEEVVWVKRDDARSAGKLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDD 73
            ||.|..:|.          .|..||||:|..|.:.|.|||:||||||.|...:.:.|..:..:.|
Zfish    14 HHTELYAEV----------PASCLPIVYSPEYNITFMGLEKLHPFDAGKWGKVIRFLKEEQFITD 68

  Fly    74 GSFYEPTELTKDQLRRIHTREYLKSLR---------WSMNVACIAEVPLMAFVPNRYIQRSYLRP 129
            .......|.::..|..:||..||..|:         ||:.||.|.|:|.:.|:||..:||..|||
Zfish    69 EIIVLAREASEADLLVVHTARYLNRLKNAILEGSREWSLVVATITEIPPLLFLPNFLVQRKVLRP 133

  Fly   130 MRFQAAGSILAGKLALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRI-- 192
            :|.|..|:|:|||||:|.|||||:|||||||.|.:|||||.||||:|.|..|||    ||..:  
Zfish   134 LRTQTGGTIMAGKLAIDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFE----RVEGVAS 194

  Fly   193 -MIVDLDAHQGNGHERDFNNVAAVYIFDMYNAFVYPRDHVAKESIRCAVELRNYTEDGFYLRQLK 256
             .|:||||||||||||||.....|||.|:||..:||.|..||.:|:..|||...|||..||:::.
Zfish   195 ATIIDLDAHQGNGHERDFLEDRRVYIMDVYNRHIYPGDGYAKRAIKRKVELDWGTEDSEYLQKVD 259

  Fly   257 RCLMQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTFRALGIPVVMLLSGGY 321
            .....:|.|.|||:::||||||:|:|||||.||||.:|:|:||.::|...|..|||::|:.||||
Zfish   260 LHSEGALNEARPDIIIYNAGTDILDGDPLGGLAISPQGIIKRDEIIFRAARRRGIPILMVTSGGY 324

  Fly   322 LKASAGVITDSIVNLRLQGLL 342
            .|.:|.:|.|||:||..|||:
Zfish   325 QKKTARIIADSILNLHRQGLI 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 145/296 (49%)
hdac11XP_021335266.2 None

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