DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and hdac3

DIOPT Version :9

Sequence 1:NP_001247296.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_957284.1 Gene:hdac3 / 393965 ZFINID:ZDB-GENE-040426-847 Length:428 Species:Danio rerio


Alignment Length:311 Identity:86/311 - (27%)
Similarity:131/311 - (42%) Gaps:74/311 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 HPFDAAKGKHIHKL-LCAQLQLDDGSF-----YEPTELTKDQLRRIHTREYL------------- 96
            ||...      |:| |...|.|..|.:     ::|.:.::..:.|.|:.:|:             
Zfish    22 HPMKP------HRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFHSEDYIDFLQKVSPNNMQG 80

  Fly    97 --KSLRWSMNVA--CIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDY---GWAINLG 154
              |||. :.||.  |.....|..|. :||             .|:.|.|...|::   ..|||..
Zfish    81 FTKSLN-TFNVGGDCPVFPGLFEFC-SRY-------------TGASLQGATQLNHKICDIAINWA 130

  Fly   155 GGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDF---NNVAAVY 216
            ||.||...:...|||...||.:.|:.|.:..|    |::.:|:|.|.|:|.:..|   :.|..| 
Zfish   131 GGLHHAKKFEASGFCYVNDIVISILELLKYHP----RVLYIDIDIHHGDGVQEAFYLTDRVMTV- 190

  Fly   217 IFDMYNAFVYPRD----HVAKESIR--CA-VELRNYTEDGFYLRQLKRCLMQSLAEF-RPDMVVY 273
            .|..|..:.:|..    .|..||.|  |. |.||:..:|..| |||.:.:::.:.:| :|..:|.
Zfish   191 SFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSY-RQLFQPVIKQVVDFYQPTCIVL 254

  Fly   274 NAGTDVLEGDPLG--NLAISAEG-VIERDRLVFSTFRALGIPVVMLLSGGY 321
            ..|.|.|..|.||  ||:|...| .:|       ..:...||:::|..|||
Zfish   255 QCGADSLGCDRLGCFNLSIRGHGECVE-------FVKGFKIPLLVLGGGGY 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_001247296.1 HDAC_classIV 51..336 CDD:212519 86/311 (28%)
hdac3NP_957284.1 PTZ00063 1..394 CDD:240251 86/311 (28%)
HDAC3 3..383 CDD:212529 86/311 (28%)
Histone deacetylase 3..316 86/311 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..428
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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