DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and Hdac10

DIOPT Version :9

Sequence 1:NP_001247296.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_006242280.1 Gene:Hdac10 / 362981 RGDID:1305874 Length:666 Species:Rattus norvegicus


Alignment Length:352 Identity:77/352 - (21%)
Similarity:135/352 - (38%) Gaps:84/352 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TERVHHEEQESEEVVWVKRDDARSAGKLPIVFSRNYAVRFGGLERL-HPFDAAKGKHIHKLLCAQ 68
            |..|:||:..:..::|   ||.....:.|              ||| ...|..:.:.:.: .|..
  Rat     3 TALVYHEDMTATRLLW---DDPECEIECP--------------ERLTAALDGLRQRGLEE-RCQC 49

  Fly    69 LQLDDGSFYEPTELTKDQLRRIHTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQ 133
            |.:        .|.::::|..:|:.||:..::.:..:    :...:..:..:| ...|..|..|.
  Rat    50 LSV--------CEASEEELGLVHSPEYIALVQKTQTL----DKEELHTLSKQY-DAVYFHPDTFH 101

  Fly   134 ----AAG-------SILAGKLALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPF 187
                |||       ::|.|  |:..|.|:....| ||.......|||.:.:::  |.....::.:
  Rat   102 CARLAAGAALRLVDAVLTG--AVHNGVALVRPPG-HHSQRAAANGFCVFNNVA--IAARHAKQKY 161

  Fly   188 RVRRIMIVDLDAHQGNGHERDFNNVAAVYIFDMYN-------AFVYPRDHVAKESIRCAVELRNY 245
            .::||:|||.|.|.|.|.:..|.:..:|..|..:.       .|:...|         |..:...
  Rat   162 GLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESD---------ADTVGRG 217

  Fly   246 TEDGF---------------YLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGV 295
            ...||               ||......|:....||.|::|:.:||.|...|||.|.:..:.|..
  Rat   218 RGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF 282

  Fly   296 IERDRLVFSTFRAL-GIPVVMLLSGGY 321
            ....:|:    :.| |..:..:|.|||
  Rat   283 AHLTQLL----QVLAGGRICAVLEGGY 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_001247296.1 HDAC_classIV 51..336 CDD:212519 66/305 (22%)
Hdac10XP_006242280.1 Arginase_HDAC 18..354 CDD:302587 73/337 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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