DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and Hdac11

DIOPT Version :10

Sequence 1:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_063141890.1 Gene:Hdac11 / 297453 RGDID:1311706 Length:370 Species:Rattus norvegicus


Alignment Length:342 Identity:174/342 - (50%)
Similarity:220/342 - (64%) Gaps:15/342 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RLTERVHHEE--QESEEVVWVKRDDARSAGKLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLL 65
            |..||.|..:  |...|..|            |||:|..|.:.|.|||:||||||.|...:...|
  Rat    20 RAGERPHATQLYQHVPEKRW------------PIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL 72

  Fly    66 CAQLQLDDGSFYEPTELTKDQLRRIHTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPM 130
            ..:..|.||...|..|.:::.|..:|||.||..|:||..||.|.|:|.:.|:||..:||..|||:
  Rat    73 KEEKLLSDGMLVEAREASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPL 137

  Fly   131 RFQAAGSILAGKLALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIV 195
            |.|..|:|:|||||::.|||||:|||||||.|.||||||.||||:|.|..|||:.. .:.|..|:
  Rat   138 RTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVE-GISRATII 201

  Fly   196 DLDAHQGNGHERDFNNVAAVYIFDMYNAFVYPRDHVAKESIRCAVELRNYTEDGFYLRQLKRCLM 260
            ||||||||||||||.....|||.|:||..:||.|..|||:||..|||...|||..||.:::|.:.
  Rat   202 DLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVELEWGTEDEEYLEKVERNVR 266

  Fly   261 QSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTFRALGIPVVMLLSGGYLKAS 325
            :||.|..||:|||||||||||||.||.|:||..|:::||.:||...||..||::|:.||||.|.:
  Rat   267 RSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVTSGGYQKRT 331

  Fly   326 AGVITDSIVNLRLQGLL 342
            |.:|.|||:||...||:
  Rat   332 ARIIADSILNLHDLGLI 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 153/284 (54%)
Hdac11XP_063141890.1 None

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