DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and Hdac11

DIOPT Version :9

Sequence 1:NP_001247296.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_659168.1 Gene:Hdac11 / 232232 MGIID:2385252 Length:347 Species:Mus musculus


Alignment Length:310 Identity:167/310 - (53%)
Similarity:212/310 - (68%) Gaps:1/310 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRIHTREYLK 97
            |||:|..|.:.|.|||:||||||.|...:...|..:..|.||...|..|.:::.|..:|||.||.
Mouse    17 PIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEAREASEEDLLVVHTRRYLN 81

  Fly    98 SLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWAINLGGGFHHCCS 162
            .|:||..||.|.|:|.:.|:||..:||..|||:|.|..|:|:|||||::.|||||:|||||||.|
Mouse    82 ELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSS 146

  Fly   163 YRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFNNVAAVYIFDMYNAFVYP 227
            .||||||.||||:|.|..|||:.. .:.|..|:||||||||||||||.....|||.|:||..:||
Mouse   147 DRGGGFCAYADITLAIKFLFERVE-GISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYP 210

  Fly   228 RDHVAKESIRCAVELRNYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISA 292
            .|..|||:||..|||...|||..||.:::|.:.:||.|..||:|||||||||||||.||.|:||.
Mouse   211 GDRFAKEAIRRKVELEWGTEDEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISP 275

  Fly   293 EGVIERDRLVFSTFRALGIPVVMLLSGGYLKASAGVITDSIVNLRLQGLL 342
            .|:::||.:||...||..||::|:.||||.|.:|.:|.|||:||...||:
Mouse   276 AGIVKRDEVVFRVVRAHDIPILMVTSGGYQKRTARIIADSILNLHDLGLI 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_001247296.1 HDAC_classIV 51..336 CDD:212519 153/284 (54%)
Hdac11NP_659168.1 Histone deacetylase 14..318 163/301 (54%)
HDAC_classIV 35..319 CDD:212519 153/284 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849188
Domainoid 1 1.000 295 1.000 Domainoid score I1481
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11743
Inparanoid 1 1.050 326 1.000 Inparanoid score I2462
Isobase 1 0.950 - 0 Normalized mean entropy S2192
OMA 1 1.010 - - QHG57761
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006007
OrthoInspector 1 1.000 - - oto93545
orthoMCL 1 0.900 - - OOG6_103672
Panther 1 1.100 - - LDO PTHR48252
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3706
SonicParanoid 1 1.000 - - X4306
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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