DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HDAC11 and hda-11

DIOPT Version :9

Sequence 1:NP_001247296.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_505699.3 Gene:hda-11 / 183226 WormBaseID:WBGene00007953 Length:334 Species:Caenorhabditis elegans


Alignment Length:338 Identity:138/338 - (40%)
Similarity:209/338 - (61%) Gaps:14/338 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EQESEEVVWVKRDDARSAGKLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSF 76
            |::.:|:..:|      :.:.|||:...|.|...|:|.|||||::|.:.:...|.....:.|.:.
 Worm     3 ERDKDEIFSLK------SYQRPIVYHSEYNVTAFGIEHLHPFDSSKWRRVITHLKEMNLITDETL 61

  Fly    77 YEPTELTKDQLRRIHTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAG 141
            .||...|.::|.|:|.|:||||:|..:..|.|.|:|.:..:|...|:...|.|:|.||.|::||.
 Worm    62 VEPNLPTFEELTRVHDRKYLKSVRNPIKAAQIVEIPFVGCLPPCIIESKLLHPLRLQAGGTVLAA 126

  Fly   142 KLALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHE 206
            .|||.:|||||:||||||.....|||||.||||::.|..||:::  .:...::|||||||||||.
 Worm   127 NLALKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKK--AIANAIVVDLDAHQGNGHA 189

  Fly   207 RDFNNVAAVYIFDMYNAFVYPRDHVAKESIRCAVELRNYTEDGFYLRQLKRCLMQSLAEFRP--- 268
            |||.:...|::||::|.:|||.|..|::.|..||.:..:|.|..||.:|::.|.|.|.:...   
 Worm   190 RDFADNPNVFVFDVFNPYVYPHDREARQFINRAVHVNGHTTDTSYLSELRKQLAQCLIDREKTTP 254

  Fly   269 ---DMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTFRALGIPVVMLLSGGYLKASAGVIT 330
               |.:::|||||.|.|||||.:.:|.:.:|.||.:||:..::.|||:.|:.||||.|.:|.:|.
 Worm   255 PGFDFIMFNAGTDCLLGDPLGAMKLSPQCIIARDEVVFNLAKSKGIPICMVTSGGYQKDNALLIA 319

  Fly   331 DSIVNLRLQGLLN 343
            .||.||:.:.|::
 Worm   320 KSIENLQSKNLIS 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_001247296.1 HDAC_classIV 51..336 CDD:212519 124/290 (43%)
hda-11NP_505699.3 HDAC_classIV 36..325 CDD:212519 124/290 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166325
Domainoid 1 1.000 238 1.000 Domainoid score I1287
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11743
Inparanoid 1 1.050 261 1.000 Inparanoid score I1910
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57761
OrthoDB 1 1.010 - - D1037375at2759
OrthoFinder 1 1.000 - - FOG0006007
OrthoInspector 1 1.000 - - oto19830
orthoMCL 1 0.900 - - OOG6_103672
Panther 1 1.100 - - LDO PTHR48252
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3706
SonicParanoid 1 1.000 - - X4306
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

Return to query results.
Submit another query.