DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and hda-6

DIOPT Version :9

Sequence 1:NP_001247296.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001122780.1 Gene:hda-6 / 177316 WormBaseID:WBGene00018319 Length:957 Species:Caenorhabditis elegans


Alignment Length:350 Identity:79/350 - (22%)
Similarity:138/350 - (39%) Gaps:77/350 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IVFSRNYAVRFGGLERLHPFDAAKGKHIHKLL-------------CAQLQLDDGSFYEPTELTKD 85
            |.|:......|...|..||...|:.:.|.|.|             |.::            .|.:
 Worm   431 IYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVDRNCERI------------ATNE 483

  Fly    86 QLRRIHTREYLKSLRWSMNVACIAEVPLMAFVPNR----YIQRSYLRPMRFQAAGSILAG----- 141
            ::|.:||::.|:.||   ....:.:..||......    |:.|..|:..| :|.|::|..     
 Worm   484 EIRLVHTKKMLEHLR---TTETMKDEELMEEAEKEFNSIYLTRDTLKVAR-KAVGAVLQSVDEIF 544

  Fly   142 -KLALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGH 205
             |.|......:.:....||..:.:..|||.:.:::  :...:.|...:.:|::|:|.|.|.|||.
 Worm   545 EKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVA--VAAKYAQRRHKAKRVLILDWDVHHGNGT 607

  Fly   206 ERDF---NNV--AAVYIFDMYNAFVY--PRDHV-----AKESIRCAVELRN-YTEDGFYLRQLKR 257
            :..|   :||  .:::..|..|.:..  |:|:.     |.|.:...|.... ...|..|....:|
 Worm   608 QEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQR 672

  Fly   258 CLMQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTFRAL--------GIPVV 314
            .:|....:|.||:|:.:||.|....||||...::.|           ||..:        |..::
 Worm   673 VIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPE-----------TFALMTYQLSSLAGGRII 726

  Fly   315 MLLSGGY----LKASAGVITDSIVN 335
            .:|.|||    :..||..:.:.:.|
 Worm   727 TVLEGGYNLTSISNSAQAVCEVLQN 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_001247296.1 HDAC_classIV 51..336 CDD:212519 74/332 (22%)
hda-6NP_001122780.1 Arginase_HDAC 32..366 CDD:388375
Arginase_HDAC 440..795 CDD:388375 76/340 (22%)
zf-UBP 877..939 CDD:366940
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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