DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and hda-10

DIOPT Version :9

Sequence 1:NP_001247296.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_496910.1 Gene:hda-10 / 175039 WormBaseID:WBGene00001838 Length:517 Species:Caenorhabditis elegans


Alignment Length:285 Identity:64/285 - (22%)
Similarity:117/285 - (41%) Gaps:39/285 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 ELTKDQLRRIHTREYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSI------L 139
            |..:.::..:||:.|:..::.:..:....:........:.|:..:.....:..|..||      :
 Worm    58 EAEESEILAVHTKRYVDDVKSTETMTVEQQESFCTKYEDIYVNSATWHRAKLAAGASIDLMTSVM 122

  Fly   140 AGKLALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNG 204
            |.|..   |.|.....| ||.....|.|||.:.::::......:..    ::::|||.|.|.|||
 Worm   123 AAKRP---GIAFIRPPG-HHAMPDEGCGFCIFNNVAIAAKAAIQNG----QKVLIVDYDVHAGNG 179

  Fly   205 -----HERDFNNVAAVYIFDMYNAFVYPR------DHVAKESIRCAVELRNYTEDGFYLRQLKRC 258
                 .:....||..:.|....|...:|.      .|..|.:|...:.....| |..|.......
 Worm   180 TQECVEQMGEGNVQLISIHRYENGHFWPNMPQTGIYHNYKNTINLPLNTIGLT-DADYHALFTHI 243

  Fly   259 LMQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTFRALGIPVVMLLSGGY-L 322
            ::.::..|:||:::.::|.|...|||.|::.::..|.....|::..|    ||||..||.||| |
 Worm   244 ILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATMIRMLIDT----GIPVAALLEGGYFL 304

  Fly   323 KASA--------GVITDSIVNLRLQ 339
            .|.|        .::.:.|..:|::
 Worm   305 DALAADSEWVLRALLGEEIPRIRVE 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_001247296.1 HDAC_classIV 51..336 CDD:212519 63/280 (23%)
hda-10NP_496910.1 HDAC10_HDAC6-dom1 20..346 CDD:212526 64/285 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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