DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and HDAC4

DIOPT Version :10

Sequence 1:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_061497881.1 Gene:HDAC4 / 1271834 VectorBaseID:AGAMI1_002562 Length:1199 Species:Anopheles gambiae


Alignment Length:368 Identity:84/368 - (22%)
Similarity:138/368 - (37%) Gaps:100/368 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ERLHP------FDAAKGKHI--------HKLLCAQLQ------LDDGSFYEPTEL-----TKDQL 87
            ::|.|      ||:...||:        |.....:||      |..|......:|     |:::|
Mosquito   762 QKLRPATTGLAFDSLMLKHVCACGDNANHPEHSGRLQSIWARLLGTGLAIRCDKLRSRKATQEEL 826

  Fly    88 RRIHT-------------REYLKSLRWS-MNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSI 138
            :.:||             |:.:.:.|.| :.:||......:....|.:          ..||.:.
Mosquito   827 QTVHTEGHALLFGTSQLNRQKVDTSRVSFVRLACGGVGVDLDTTWNEH----------HTAAAAR 881

  Fly   139 LAGKLALDYGWAINLG---GGF-------HHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIM 193
            :|....:|..:.:..|   .||       ||..:....|||.:..|:|....|..:.|..:|||:
Mosquito   882 MAAGCVIDLSYKVARGENRNGFAVVRPPGHHAEADAAMGFCFFNSIALAARLLRHRMPHEMRRIL 946

  Fly   194 IVDLDAHQGNGHERDFNNVAAVYIFDMY---NAFVYPRDHVAKESIRCAV--------------E 241
            |||.|.|.|||.::.|.:.|:|....::   :...:|......|   |.|              .
Mosquito   947 IVDWDVHHGNGTQQAFYDDASVLYLSVHRHDDGNFFPGTGGPAE---CGVGTGLGYNVNVAWSGG 1008

  Fly   242 LRNYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEGD--PLGNLAISAE--GVIERDRLV 302
            :.....|..||...:..:|....:|.||:|:.:||.|...|.  |||...:|..  |.:.|:.:.
Mosquito  1009 VNPPLGDAEYLAAFRTVVMPIARDFAPDIVLVSAGFDAAVGHPAPLGGYVVSPACFGHLTRELMQ 1073

  Fly   303 FSTFRALGIPVVMLLSGGY------------LKASAGVITDSI 333
            .:..:     :|:.|.|||            ::|..|..|.||
Mosquito  1074 LANGK-----IVLALEGGYDLPAICDSAEECVRALLGESTSSI 1111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 83/365 (23%)
HDAC4XP_061497881.1 None

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