DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and hdac11

DIOPT Version :10

Sequence 1:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_031757153.1 Gene:hdac11 / 116410488 XenbaseID:XB-GENE-29077283 Length:332 Species:Xenopus tropicalis


Alignment Length:314 Identity:156/314 - (49%)
Similarity:212/314 - (67%) Gaps:1/314 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 AGKLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRIHTR 93
            |.:.||::|..|.:.|.|||:|||||:.|...:...|..:..:.:.:.....|..::.|...|||
 Frog    13 ATRWPIIYSAEYNITFIGLEKLHPFDSGKWGKVIGFLQEEKLVTEETLVPAIEAKEEDLLVAHTR 77

  Fly    94 EYLKSLRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWAINLGGGFH 158
            .||..|:||..||.|.|:|.:..:||..:||..|:|:|||..|:|:|||||::.|||||:|||||
 Frog    78 RYLNKLKWSYVVATITEIPPLFLLPNFLVQRKVLKPLRFQTGGTIMAGKLAMERGWAINVGGGFH 142

  Fly   159 HCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFNNVAAVYIFDMYNA 223
            ||...||||||.||||:|.|..|||:.. .|.:..|:||||||||||||||.....|||.|:||.
 Frog   143 HCSGDRGGGFCAYADITLAIKFLFERVE-GVSKATIIDLDAHQGNGHERDFMEDKRVYIMDVYNR 206

  Fly   224 FVYPRDHVAKESIRCAVELRNYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEGDPLGNL 288
            .:||.||.||.:||..|||...|||..||.:::..:..:|.|.|||::|||||||:|:|||||.|
 Frog   207 HIYPGDHSAKRAIRRKVELDWGTEDKEYLNKVETHVRGALNEERPDIIVYNAGTDILDGDPLGGL 271

  Fly   289 AISAEGVIERDRLVFSTFRALGIPVVMLLSGGYLKASAGVITDSIVNLRLQGLL 342
            :||.:|:::||.:||:..|:..||::|:.||||.|.:|.:|.|||:||...||:
 Frog   272 SISPQGIVKRDEIVFAVARSQRIPILMVTSGGYQKRTARIIADSILNLHSLGLI 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 142/284 (50%)
hdac11XP_031757153.1 HDAC_classIV 35..319 CDD:212519 142/284 (50%)

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