DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC11 and hdac12

DIOPT Version :10

Sequence 1:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_001920667.4 Gene:hdac12 / 100148903 ZFINID:ZDB-GENE-131121-613 Length:354 Species:Danio rerio


Alignment Length:306 Identity:96/306 - (31%)
Similarity:142/306 - (46%) Gaps:45/306 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LPIVFSRNYAVRF-GGLERLHPFDAAKGKHIHKLLCAQLQLDDGSFYEPTELTKDQLRRIHTREY 95
            ||||    :.|:| ..|...|.|...|...|.:.|.....:.|...:.|...:::.||.:||.||
Zfish    51 LPIV----HHVKFICELPENHRFPMLKFPKILESLLRDQAITDKQVWAPKIASEELLRCVHTEEY 111

  Fly    96 LKS---------------LRWSMNVACIAEVPLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLAL 145
            |.:               ..||..:                :||     .|::..|::|||::||
Zfish   112 LSNFISGKISEKDQKRSGFPWSSGL----------------VQR-----CRYETGGTLLAGQIAL 155

  Fly   146 DYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFN 210
            ..|.|.:..||.||.....|.|||...|:::....|. .||...|:|:|||||.|||:|....|.
Zfish   156 QRGLACSTAGGTHHAFPSHGSGFCLLNDLAVTAKHLI-SEPTPKRKILIVDLDVHQGDGTAFIFK 219

  Fly   211 NVAAVYIFDMYNAFVYPRDHVAKESIRCAVELRNYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNA 275
            :..:|:.|.::....:|   :.|:.....|.|.:.|||..||.:::..|...|..||||:|:|::
Zfish   220 DEPSVFTFSVHCQRNFP---LRKQQSDLDVSLEDGTEDREYLSRVQEHLPWLLESFRPDLVLYDS 281

  Fly   276 GTDVLEGDPLGNLAISAEGVIERDRLVFSTFRALGIPVVMLLSGGY 321
            |.|....|.||.|.::.||:..||..|..|....||||..::.|||
Zfish   282 GVDPHWDDELGKLRLTDEGLYRRDLYVLHTVVKSGIPVATVIGGGY 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 89/286 (31%)
hdac12XP_001920667.4 HDAC_classIV 67..342 CDD:212519 89/286 (31%)

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