DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HDAC11 and HDAC5

DIOPT Version :9

Sequence 1:NP_001247296.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_016879477.1 Gene:HDAC5 / 10014 HGNCID:14068 Length:1161 Species:Homo sapiens


Alignment Length:383 Identity:85/383 - (22%)
Similarity:151/383 - (39%) Gaps:104/383 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VHHEEQESEEVVWVKRDDA-------RSAGK------LPIVFSRNYAVRFG--GLERLHPFDAAK 57
            ||.|.....:.:|.:..:.       |..|:      :..|.|..:.:.:|  .|.| ...|:.|
Human   742 VHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNR-QKLDSKK 805

  Fly    58 -----GKHIHKLL-CAQLQLDDGSFYEPTELTKDQLRRIHTREYLKSLRWSMNVACIAEVPLMAF 116
                 .:.::.:| |..:.:|..:.:          ..:|:...::     |.|.|:.|   :||
Human   806 LLGPISQKMYAVLPCGGIGVDSDTVW----------NEMHSSSAVR-----MAVGCLLE---LAF 852

  Fly   117 VPNRYIQRSYLRPMRFQAAGSILAGKLALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRL 181
                                .:.||:  |..|:||....| ||.......|||.:..:::....|
Human   853 --------------------KVAAGE--LKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLL 894

  Fly   182 FEQEPFRVRRIMIVDLDAHQGNGHERDFNNVAAVYIFDMY---NAFVYPRDHVAKE--------- 234
              |:...|.:::|||.|.|.|||.::.|.|..:|....::   |...:|.....:|         
Human   895 --QQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGY 957

  Fly   235 SIRCAVELRNYT-------EDGFYLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEG--DPLGNLAI 290
            ::..|     :|       .|..||...:..:|....||.||:|:.:||.|.:||  .|||..::
Human   958 NVNVA-----WTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSV 1017

  Fly   291 SAE--GVIERDRLVFSTFRALGIPVVMLLSGGY-----LKASAGVITDSIVNLRLQGL 341
            :|.  |.:.|..:..:     |..||:.|.||:     ..||...:: :::::.||.|
Human  1018 TARCFGHLTRQLMTLA-----GGRVVLALEGGHDLTAICDASEACVS-ALLSVELQPL 1069

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC11NP_001247296.1 HDAC_classIV 51..336 CDD:212519 71/318 (22%)
HDAC5XP_016879477.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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