DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg16 and Dcaf8

DIOPT Version :9

Sequence 1:NP_001138124.2 Gene:Atg16 / 326115 FlyBaseID:FBgn0039705 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001344133.1 Gene:Dcaf8 / 98193 MGIID:91860 Length:591 Species:Mus musculus


Alignment Length:447 Identity:91/447 - (20%)
Similarity:153/447 - (34%) Gaps:116/447 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 NSSPAQFVGGLIGDE---DFDEAAINGAMEAIGLDDNEYISARFTAGEIAENS--RASIDTLKAT 307
            :|||.:..|...|.|   ..:..|.:.::...|.|.....::..:.|...|:|  ....|:::.|
Mouse    21 SSSPEEMSGAEEGRETSSGIEVEASDLSLSLTGDDGGPNRTSTESRGTDTESSGEEKDSDSMEDT 85

  Fly   308 GYL-------GQANPTKILMKFEAHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTEPRAV 365
            |:.       |..:..:     |..|...|..:.....|...:...:|.::.|...:.:..||..
Mouse    86 GHYSINDESRGHGHSDE-----EDEEQPRHRGQRKRASRDQDSSDDERALEDWVSSETTALPRPR 145

  Fly   366 LSGSSAGINSVDFDSTGAYILGTSNDYGARVWTVMDNRLRHTLTGHSGKVMAAKYVQEPIKVVTG 430
            .....| :...:..|:..::....   ||||: |...||:|.|.||:|.|....:.|....:.:|
Mouse   146 WQALPA-LRERELGSSARFVYEAC---GARVF-VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASG 205

  Fly   431 SHDRTLKIWD---------------------------------------------LRSIACIE-- 448
            |.|..:.:||                                             |.:..|.:  
Mouse   206 SDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATQCCKNT 270

  Fly   449 ---TKFAGSSCNDLVTTDSLGSTIISGHYDKKIRFWDIRTEKQADDVLMPAKITSLDLSKDCNYL 510
               .:..|:|....:..|| ..|.:|...|..:...|:|.::.|..::    :|.....|...|.
Mouse   271 KRVAQHKGASHKLALEPDS-PCTFLSAGEDAVVFTIDLRQDRPASKLV----VTKEKEKKVGLYT 330

  Fly   511 I-----------CSVRDDTIKLLDLRK------NQVISTFTNEHF-------KISC-----DFAR 546
            |           ...||..:::.|.||      |.|:..|...|.       .|:|     |...
Mouse   331 IYVNPANTHQFAVGGRDQYVRIYDQRKIDENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTE 395

  Fly   547 --ASFNSSGLKIACGS-ADGAIYIWNVNGFL-EATLKGHSTAVNAVSWSPNNNMLAS 599
              ||:|...:.:...| :|||.||....|.. .||:||    ||  .:.|.:..:.|
Mouse   396 LLASYNDEDIYLFNSSHSDGAQYIKRYKGHRNNATVKG----VN--FYGPKSEFVVS 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg16NP_001138124.2 ATG16 11..197 CDD:285778
SynN 120..229 CDD:294095
WD40 322..605 CDD:238121 75/361 (21%)
WD40 repeat 331..368 CDD:293791 5/36 (14%)
WD40 <341..612 CDD:225201 71/342 (21%)
WD40 repeat 374..410 CDD:293791 10/35 (29%)
WD40 repeat 415..453 CDD:293791 9/87 (10%)
WD40 repeat 461..491 CDD:293791 8/29 (28%)
WD40 repeat 498..536 CDD:293791 12/54 (22%)
WD40 repeat 544..579 CDD:293791 12/38 (32%)
WD40 repeat 585..609 CDD:293791 4/15 (27%)
Dcaf8NP_001344133.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..140 22/123 (18%)
2A1904 <17..177 CDD:273344 31/165 (19%)
Nuclear export signal. /evidence=ECO:0000250|UniProtKB:Q5TAQ9 40..51 1/10 (10%)
WD40 183..500 CDD:392136 57/275 (21%)
WD 1 185..224 10/38 (26%)
WD40 repeat 192..228 CDD:293791 6/35 (17%)
WD 2 228..269 2/40 (5%)
WD40 repeat 234..275 CDD:293791 2/40 (5%)
WD 3 275..315 10/40 (25%)
WD40 repeat 280..321 CDD:293791 10/45 (22%)
WD 4 323..363 8/39 (21%)
WD40 repeat 329..377 CDD:293791 11/47 (23%)
WD 5 379..418 10/38 (26%)
WD40 repeat 384..423 CDD:293791 12/38 (32%)
WD 6 426..466 8/27 (30%)
WD40 repeat 431..468 CDD:293791 6/22 (27%)
WD 7 470..509
WD40 repeat 475..499 CDD:293791
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 552..591
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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