| Sequence 1: | NP_001138124.2 | Gene: | Atg16 / 326115 | FlyBaseID: | FBgn0039705 | Length: | 612 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_004805.2 | Gene: | SNRNP40 / 9410 | HGNCID: | 30857 | Length: | 357 | Species: | Homo sapiens |
| Alignment Length: | 317 | Identity: | 92/317 - (29%) |
|---|---|---|---|
| Similarity: | 148/317 - (46%) | Gaps: | 27/317 - (8%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 308 GYLGQANPTKI------LMKFEAHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTEPRAVL 366
Fly 367 SGSSAGINSVDFDSTGAYILGTSNDYGARVWTVMDNRLRHTLTGHSGKVMAAKYVQE-PIKVVTG 430
Fly 431 SHDRTLKIWDLRSIACIETKFAGSSCNDLVTTDSLGSTIISGHYDKKIRFWDIRTEK-------Q 488
Fly 489 ADDVLMPAKITSLDLSKDCNYLICSVRDDTIKLLDLR----KNQVISTFTNEHFKISCDFARASF 549
Fly 550 NSSGLKIACGSADGAIYIWNVNG-FLEATLKGHSTAVNAVSWSPNNNMLASVGKNKR 605 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Atg16 | NP_001138124.2 | ATG16 | 11..197 | CDD:285778 | |
| SynN | 120..229 | CDD:294095 | |||
| WD40 | 322..605 | CDD:238121 | 84/295 (28%) | ||
| WD40 repeat | 331..368 | CDD:293791 | 9/36 (25%) | ||
| WD40 | <341..612 | CDD:225201 | 82/278 (29%) | ||
| WD40 repeat | 374..410 | CDD:293791 | 6/35 (17%) | ||
| WD40 repeat | 415..453 | CDD:293791 | 16/38 (42%) | ||
| WD40 repeat | 461..491 | CDD:293791 | 12/36 (33%) | ||
| WD40 repeat | 498..536 | CDD:293791 | 12/41 (29%) | ||
| WD40 repeat | 544..579 | CDD:293791 | 12/35 (34%) | ||
| WD40 repeat | 585..609 | CDD:293791 | 6/21 (29%) | ||
| SNRNP40 | NP_004805.2 | WD40 | 62..351 | CDD:238121 | 86/297 (29%) |
| WD 1 | 64..103 | 10/39 (26%) | |||
| WD40 repeat | 70..107 | CDD:293791 | 9/37 (24%) | ||
| WD 2 | 107..146 | 7/38 (18%) | |||
| WD40 repeat | 112..148 | CDD:293791 | 5/35 (14%) | ||
| WD 3 | 149..189 | 16/39 (41%) | |||
| WD40 repeat | 155..190 | CDD:293791 | 14/35 (40%) | ||
| WD 4 | 191..230 | 12/38 (32%) | |||
| WD40 repeat | 196..232 | CDD:293791 | 12/35 (34%) | ||
| WD 5 | 233..272 | 14/44 (32%) | |||
| WD40 repeat | 238..278 | CDD:293791 | 12/45 (27%) | ||
| WD 6 | 283..322 | 12/38 (32%) | |||
| WD40 repeat | 288..312 | CDD:293791 | 11/23 (48%) | ||
| WD 7 | 325..357 | 8/26 (31%) | |||
| WD40 repeat | 330..352 | CDD:293791 | 6/21 (29%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||