DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg16 and Atg16l1

DIOPT Version :9

Sequence 1:NP_001138124.2 Gene:Atg16 / 326115 FlyBaseID:FBgn0039705 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001192320.1 Gene:Atg16l1 / 77040 MGIID:1924290 Length:623 Species:Mus musculus


Alignment Length:641 Identity:245/641 - (38%)
Similarity:379/641 - (59%) Gaps:68/641 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 WRAHVVRRLRERNRKECDNFKEIIEQNNRLIDHVAQLKAD-----NLKISVENEQL--RNAVSTG 65
            |:.|:...||.|:|.:...|:|||.|..:|::     |:|     ..|:..|...:  |:.:|.|
Mouse    13 WKRHIAEELRRRDRLQRQAFEEIILQYTKLLE-----KSDLHSVLTQKLQAEKHDMPNRHEISPG 72

  Fly    66 --GTGSNVAIATLEKKLLSQQEELTELHKRKGENSQMIVDLNQKVEQQRIIISEKEHSLVEQQTN 128
              |..::..:..:.:..:..|||||||||::||.:|:::|||.:::|:...|...|..:.|....
Mouse    73 HDGAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQKDKEIQMNEAKISEYLQT 137

  Fly   129 NNRLRAEVQLLHSSLEELKKLNNTMLDEHTALQLAFSSLEEKLRGVQDENRRLLERLMQYKSKDA 193
            .:.|......|.:.|::|:..|.|:.||:.|||:.|::||||||...:||:.|:.|.|..|:::|
Mouse   138 ISDLETNCLDLRTKLQDLEVANQTLKDEYDALQITFTALEEKLRKTTEENQELVTRWMAEKAQEA 202

  Fly   194 DKLNEENESIIRKRLPSIFRKRSAKLKRDLEDAVREP---------------SSSSNAASSP--- 240
            ::||.|||        ...|:|.|:|:::|.:|.:||               :|.....:||   
Mouse   203 NRLNAENE--------KDSRRRQARLQKELAEAAKEPLPVEQDDDIEVIVDETSDHTEETSPVRA 259

  Fly   241 -GAASLQRNSSPAQFVGGLIGDEDFDEAAINGAMEAIGLDDNEYISARFTAGEIAENSRASI--- 301
             ..|:.:|.|.||   |||          ::......||.::..: ...::......|.:||   
Mouse   260 VSRAATKRLSQPA---GGL----------LDSITNIFGLSESPLL-GHHSSDAARRRSVSSIPVP 310

  Fly   302 ----DTLKATGYLGQANPTKILMKFEAHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTEP 362
                ||..|:|...:. ||.....|:||:.|.:||::||..|::||||.||:||||:...:..|.
Mouse   311 QDIMDTHPASGKDVRV-PTTASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEF 374

  Fly   363 RAVLSGSSAGINSVDFDSTGAYILGTSNDYGARVWTVMDNRLRHTLTGHSGKVMAAKYVQEPIKV 427
            :..||||:|||.|::|||.|||:|..|||:.:|:|||.|.|||||||||||||::||::.:..::
Mouse   375 KGSLSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARI 439

  Fly   428 VTGSHDRTLKIWDLRSIACIETKFAGSSCNDLVTTDSLGSTIISGHYDKKIRFWDIRTEKQADDV 492
            |:||||||||:|||||..||:|.||||||||:|.|:   ..::|||:||||||||||:|....::
Mouse   440 VSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTE---QCVMSGHFDKKIRFWDIRSESVVREM 501

  Fly   493 LMPAKITSLDLSKDCNYLICSVRDDTIKLLDLRKNQVISTFTNEHFKISCDFARASFNSSGLKIA 557
            .:..|||:|||:.:...|:...|||.:|::|||.|.|..||:...||...|:.|..|:..|..:|
Mouse   502 ELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAVKQTFSAPGFKCGSDWTRVVFSPDGSYVA 566

  Fly   558 CGSADGAIYIWNV-NGFLEATL-KGHSTAVNAVSWSPNNNMLASVGKNKRCTIYSE 611
            .|||:|::|:|:| .|.:|..| |.||:::|||:|:|:...:.||.|..|..::::
Mouse   567 AGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVVSVDKGSRAVLWAQ 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg16NP_001138124.2 ATG16 11..197 CDD:285778 63/194 (32%)
SynN 120..229 CDD:294095 37/108 (34%)
WD40 322..605 CDD:238121 145/284 (51%)
WD40 repeat 331..368 CDD:293791 17/36 (47%)
WD40 <341..612 CDD:225201 137/273 (50%)
WD40 repeat 374..410 CDD:293791 22/35 (63%)
WD40 repeat 415..453 CDD:293791 21/37 (57%)
WD40 repeat 461..491 CDD:293791 15/29 (52%)
WD40 repeat 498..536 CDD:293791 17/37 (46%)
WD40 repeat 544..579 CDD:293791 14/36 (39%)
WD40 repeat 585..609 CDD:293791 9/23 (39%)
Atg16l1NP_001192320.1 ATG16 31..206 CDD:285778 58/179 (32%)
RILP-like <84..190 CDD:304877 39/105 (37%)
WD40 <332..589 CDD:225201 133/259 (51%)
WD40 333..621 CDD:238121 146/290 (50%)
WD40 repeat 343..380 CDD:293791 17/36 (47%)
WD40 repeat 386..422 CDD:293791 22/35 (63%)
WD40 repeat 427..464 CDD:293791 20/36 (56%)
WD40 repeat 472..502 CDD:293791 16/32 (50%)
WD40 repeat 507..543 CDD:293791 16/35 (46%)
WD40 repeat 553..589 CDD:293791 13/35 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834677
Domainoid 1 1.000 109 1.000 Domainoid score I6387
eggNOG 1 0.900 - - E1_KOG0288
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41786
Inparanoid 1 1.050 413 1.000 Inparanoid score I1832
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53779
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004186
OrthoInspector 1 1.000 - - oto95185
orthoMCL 1 0.900 - - OOG6_103883
Panther 1 1.100 - - O PTHR19878
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2377
SonicParanoid 1 1.000 - - X1444
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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