DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg16 and DCAF6

DIOPT Version :9

Sequence 1:NP_001138124.2 Gene:Atg16 / 326115 FlyBaseID:FBgn0039705 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001185885.1 Gene:DCAF6 / 55827 HGNCID:30002 Length:951 Species:Homo sapiens


Alignment Length:479 Identity:103/479 - (21%)
Similarity:160/479 - (33%) Gaps:163/479 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SVENEQLRNAVSTGGTGSN--------VAIATLEKKLLSQQEELTELHKRKGENSQMIVDLNQKV 108
            |.::|| |.:|...|..::        ..||.|.|:       |.:|..:|.| .|...:|....
Human   439 SPDSEQ-RQSVEASGHHTHHQSEFLRGPEIALLRKR-------LQQLRLKKAE-QQRQQELAAHT 494

  Fly   109 EQQRIIISEKEH------------------------SLVEQQTNNNRLRA-------EVQLLHSS 142
            :||.....:..|                        ||.|||.|||...:       .|..||.|
Human   495 QQQPSTSDQSSHEGSSQDPHASDSPSSVVNKQLGSMSLDEQQDNNNEKLSPKPGTGEPVLSLHYS 559

  Fly   143 LE----ELKKLNNTMLDEHTALQLAFSSLEEKLRGV--------QDEN---RRLLE--------R 184
            .|    ...|||.|  ||       :||:....||:        |:|:   :..::        :
Human   560 TEGTTTSTIKLNFT--DE-------WSSIASSSRGIGSHCKSEGQEESFVPQSSVQPPEGDSETK 615

  Fly   185 LMQYKSKDADKLNE---------------ENESIIRKRLPSIFRKRSAKLKRDLEDAVREPSSSS 234
            ..:..|:|..|..|               :::....|.|.|...:|: .|..|....|.|.|:||
Human   616 APEESSEDVTKYQEGVSAENPVENHINITQSDKFTAKPLDSNSGERN-DLNLDRSCGVPEESASS 679

  Fly   235 NAASSP--------GAASLQRNSSP-AQFVGGLIG------------------DEDFDEAAINGA 272
            ..|..|        .:|:.:.|::| .||.....|                  |.|.|...|.||
Human   680 EKAKEPETSDQTSTESATNENNTNPEPQFQTEATGPSAHEETSTRDSALQDTDDSDDDPVLIPGA 744

  Fly   273 MEAIGLDD---------NEYISARFTAGEIAENSR--------ASIDTLKATGYLGQANPTKILM 320
            ....|..|         .:.|..|.....|.|..|        ..:|||.....|       :.|
Human   745 RYRAGPGDRFNIRGTTIGDRIMRRSAVARIQEFFRRRKERKEMEELDTLNIRRPL-------VKM 802

  Fly   321 KFEAHENESHAVR----WSPVERMVATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSVD---F 378
            .::.|.|....::    |.  ...|.:|.....:.:||  :::.|...:|...:..:|.:.   |
Human   803 VYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWD--RHTAEHLMLLEADNHVVNCLQPHPF 863

  Fly   379 DSTGAYILGTSN-DYGARVWTVMD 401
            |.    ||.:|. ||..::|:.::
Human   864 DP----ILASSGIDYDIKIWSPLE 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg16NP_001138124.2 ATG16 11..197 CDD:285778 47/206 (23%)
SynN 120..229 CDD:294095 37/177 (21%)
WD40 322..605 CDD:238121 18/88 (20%)
WD40 repeat 331..368 CDD:293791 7/40 (18%)
WD40 <341..612 CDD:225201 15/65 (23%)
WD40 repeat 374..410 CDD:293791 9/32 (28%)
WD40 repeat 415..453 CDD:293791
WD40 repeat 461..491 CDD:293791
WD40 repeat 498..536 CDD:293791
WD40 repeat 544..579 CDD:293791
WD40 repeat 585..609 CDD:293791
DCAF6NP_001185885.1 WD40 <42..>281 CDD:225201
WD40 43..>292 CDD:295369
WD 1 49..88
WD40 repeat 55..92 CDD:293791
WD 2 92..133
WD40 repeat 97..138 CDD:293791
WD 3 139..179
WD40 repeat 148..181 CDD:293791
WD40 repeat 188..233 CDD:293791
WD 4 189..229
WD 5 251..290
WD40 repeat 256..282 CDD:293791
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..340
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..392
WD40 <821..880 CDD:295369 14/66 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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